Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC35,67■■■■□ 3,3
Trim52Q8CDV4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC35,63■■■■□ 3,29
Trim52Q8CDV4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC35,56■■■■□ 3,28
Trim52Q8CDV4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC35,55■■■■□ 3,28
Trim52Q8CDV4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC35,55■■■■□ 3,28
Trim52Q8CDV4 Gm17082-201ENSMUST00000166043 1091 ntBASIC35,51■■■■□ 3,28
Trim52Q8CDV4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC35,5■■■■□ 3,27
Trim52Q8CDV4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC35,47■■■■□ 3,27
Trim52Q8CDV4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC35,3■■■■□ 3,24
Trim52Q8CDV4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC35,3■■■■□ 3,24
Trim52Q8CDV4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC35,28■■■■□ 3,24
Trim52Q8CDV4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC35,28■■■■□ 3,24
Trim52Q8CDV4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35,27■■■■□ 3,24
Trim52Q8CDV4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC35,25■■■■□ 3,23
Trim52Q8CDV4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35,22■■■■□ 3,23
Trim52Q8CDV4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC35,18■■■■□ 3,22
Trim52Q8CDV4 Gm27322-201ENSMUST00000184007 104 ntBASIC35,15■■■■□ 3,22
Trim52Q8CDV4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC35,14■■■■□ 3,22
Trim52Q8CDV4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC35,11■■■■□ 3,21
Trim52Q8CDV4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC35,08■■■■□ 3,21
Trim52Q8CDV4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC35,04■■■■□ 3,2
Trim52Q8CDV4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC35,04■■■■□ 3,2
Trim52Q8CDV4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC35,03■■■■□ 3,2
Trim52Q8CDV4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC35,02■■■■□ 3,2
Trim52Q8CDV4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC34,88■■■■□ 3,17
Trim52Q8CDV4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC34,85■■■■□ 3,17
Trim52Q8CDV4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC34,84■■■■□ 3,17
Trim52Q8CDV4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC34,83■■■■□ 3,17
Trim52Q8CDV4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC34,82■■■■□ 3,17
Trim52Q8CDV4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34,81■■■■□ 3,16
Trim52Q8CDV4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC34,81■■■■□ 3,16
Trim52Q8CDV4 Gm24804-201ENSMUST00000174982 85 ntBASIC34,8■■■■□ 3,16
Trim52Q8CDV4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC34,8■■■■□ 3,16
Trim52Q8CDV4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34,79■■■■□ 3,16
Trim52Q8CDV4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC34,78■■■■□ 3,16
Trim52Q8CDV4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC34,72■■■■□ 3,15
Trim52Q8CDV4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC34,72■■■■□ 3,15
Trim52Q8CDV4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC34,69■■■■□ 3,14
Trim52Q8CDV4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC34,67■■■■□ 3,14
Trim52Q8CDV4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC34,59■■■■□ 3,13
Trim52Q8CDV4 AL845457.1-201ENSMUST00000197244 68 ntBASIC34,59■■■■□ 3,13
Trim52Q8CDV4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC34,58■■■■□ 3,13
Trim52Q8CDV4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC34,56■■■■□ 3,12
Trim52Q8CDV4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC34,55■■■■□ 3,12
Trim52Q8CDV4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC34,55■■■■□ 3,12
Trim52Q8CDV4 AC166822.3-201ENSMUST00000227394 661 ntBASIC34,53■■■■□ 3,12
Trim52Q8CDV4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC34,51■■■■□ 3,11
Trim52Q8CDV4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC34,44■■■■□ 3,1
Trim52Q8CDV4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC34,43■■■■□ 3,1
Trim52Q8CDV4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC34,4■■■■□ 3,1
Trim52Q8CDV4 Zfp131-207ENSMUST00000224946 1783 ntBASIC34,4■■■■□ 3,1
Trim52Q8CDV4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34,38■■■■□ 3,09
Trim52Q8CDV4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC34,36■■■■□ 3,09
Trim52Q8CDV4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC34,32■■■■□ 3,08
Trim52Q8CDV4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC34,31■■■■□ 3,08
Trim52Q8CDV4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC34,26■■■■□ 3,08
Trim52Q8CDV4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC34,24■■■■□ 3,07
Trim52Q8CDV4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC34,19■■■■□ 3,06
Trim52Q8CDV4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC34,18■■■■□ 3,06
Trim52Q8CDV4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC34,18■■■■□ 3,06
Trim52Q8CDV4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC34,14■■■■□ 3,06
Trim52Q8CDV4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC34,14■■■■□ 3,06
Trim52Q8CDV4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC34,12■■■■□ 3,05
Trim52Q8CDV4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC34,1■■■■□ 3,05
Trim52Q8CDV4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC34,1■■■■□ 3,05
Trim52Q8CDV4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC34,09■■■■□ 3,05
Trim52Q8CDV4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC34,08■■■■□ 3,05
Trim52Q8CDV4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC34,07■■■■□ 3,04
Trim52Q8CDV4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC34,05■■■■□ 3,04
Trim52Q8CDV4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC34,04■■■■□ 3,04
Trim52Q8CDV4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC34,03■■■■□ 3,04
Trim52Q8CDV4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC33,95■■■■□ 3,02
Trim52Q8CDV4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33,93■■■■□ 3,02
Trim52Q8CDV4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC33,91■■■■□ 3,02
Trim52Q8CDV4 Zfp131-205ENSMUST00000223812 663 ntBASIC33,91■■■■□ 3,02
Trim52Q8CDV4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC33,86■■■■□ 3,01
Trim52Q8CDV4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC33,85■■■■□ 3,01
Trim52Q8CDV4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC33,85■■■■□ 3,01
Trim52Q8CDV4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC33,79■■■■□ 3
Trim52Q8CDV4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC33,79■■■■□ 3
Trim52Q8CDV4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC33,79■■■■□ 3
Trim52Q8CDV4 Mipep-204ENSMUST00000225043 1548 ntBASIC33,79■■■■□ 3
Trim52Q8CDV4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC33,78■■■■□ 3
Trim52Q8CDV4 Peli2-204ENSMUST00000226513 1320 ntBASIC33,73■■■□□ 2,99
Trim52Q8CDV4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC33,73■■■□□ 2,99
Trim52Q8CDV4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC33,72■■■□□ 2,99
Trim52Q8CDV4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC33,7■■■□□ 2,99
Trim52Q8CDV4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC33,7■■■□□ 2,99
Trim52Q8CDV4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC33,69■■■□□ 2,98
Trim52Q8CDV4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC33,69■■■□□ 2,98
Trim52Q8CDV4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC33,68■■■□□ 2,98
Trim52Q8CDV4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC33,68■■■□□ 2,98
Trim52Q8CDV4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC33,68■■■□□ 2,98
Trim52Q8CDV4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC33,68■■■□□ 2,98
Trim52Q8CDV4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC33,67■■■□□ 2,98
Trim52Q8CDV4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC33,66■■■□□ 2,98
Trim52Q8CDV4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC33,64■■■□□ 2,98
Trim52Q8CDV4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC33,64■■■□□ 2,98
Trim52Q8CDV4 Gm16148-201ENSMUST00000119653 893 ntBASIC33,62■■■□□ 2,97
Trim52Q8CDV4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC33,59■■■□□ 2,97
Retrieved 100 of 76,532 protein–RNA pairs in 74,6 ms