Protein–RNA interactions for Protein: Q8C4X2

Csnk1g3, Casein kinase I isoform gamma-3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1g3Q8C4X2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Csnk1g3Q8C4X2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.13■■■□□ 2.41
Csnk1g3Q8C4X2 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.11■■■□□ 2.41
Csnk1g3Q8C4X2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Csnk1g3Q8C4X2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Csnk1g3Q8C4X2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Csnk1g3Q8C4X2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Csnk1g3Q8C4X2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Csnk1g3Q8C4X2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
Csnk1g3Q8C4X2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.93■■■□□ 2.38
Csnk1g3Q8C4X2 Gm27322-201ENSMUST00000184007 104 ntBASIC29.92■■■□□ 2.38
Csnk1g3Q8C4X2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Csnk1g3Q8C4X2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Csnk1g3Q8C4X2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
Csnk1g3Q8C4X2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Csnk1g3Q8C4X2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.76■■■□□ 2.35
Csnk1g3Q8C4X2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Csnk1g3Q8C4X2 Gm24804-201ENSMUST00000174982 85 ntBASIC29.69■■■□□ 2.34
Csnk1g3Q8C4X2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Csnk1g3Q8C4X2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Csnk1g3Q8C4X2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Csnk1g3Q8C4X2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.56■■■□□ 2.32
Csnk1g3Q8C4X2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Csnk1g3Q8C4X2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.54■■■□□ 2.32
Csnk1g3Q8C4X2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.54■■■□□ 2.32
Csnk1g3Q8C4X2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Csnk1g3Q8C4X2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Csnk1g3Q8C4X2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
Csnk1g3Q8C4X2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Csnk1g3Q8C4X2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.37■■■□□ 2.29
Csnk1g3Q8C4X2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
Csnk1g3Q8C4X2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Csnk1g3Q8C4X2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Csnk1g3Q8C4X2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Csnk1g3Q8C4X2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.28■■■□□ 2.28
Csnk1g3Q8C4X2 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.28■■■□□ 2.28
Csnk1g3Q8C4X2 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.25■■■□□ 2.27
Csnk1g3Q8C4X2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
Csnk1g3Q8C4X2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Csnk1g3Q8C4X2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Csnk1g3Q8C4X2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Csnk1g3Q8C4X2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Csnk1g3Q8C4X2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Csnk1g3Q8C4X2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Csnk1g3Q8C4X2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Csnk1g3Q8C4X2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Csnk1g3Q8C4X2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Csnk1g3Q8C4X2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Csnk1g3Q8C4X2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Csnk1g3Q8C4X2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Csnk1g3Q8C4X2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29.08■■■□□ 2.25
Csnk1g3Q8C4X2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Csnk1g3Q8C4X2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Csnk1g3Q8C4X2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Csnk1g3Q8C4X2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29■■■□□ 2.23
Csnk1g3Q8C4X2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
Csnk1g3Q8C4X2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Csnk1g3Q8C4X2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Csnk1g3Q8C4X2 Zfp131-205ENSMUST00000223812 663 ntBASIC28.97■■■□□ 2.23
Csnk1g3Q8C4X2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Csnk1g3Q8C4X2 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.95■■■□□ 2.22
Csnk1g3Q8C4X2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Csnk1g3Q8C4X2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Csnk1g3Q8C4X2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Csnk1g3Q8C4X2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Csnk1g3Q8C4X2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Csnk1g3Q8C4X2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Csnk1g3Q8C4X2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Csnk1g3Q8C4X2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
Csnk1g3Q8C4X2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Csnk1g3Q8C4X2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
Csnk1g3Q8C4X2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.7■■■□□ 2.18
Csnk1g3Q8C4X2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.66■■■□□ 2.18
Csnk1g3Q8C4X2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Csnk1g3Q8C4X2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Csnk1g3Q8C4X2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Csnk1g3Q8C4X2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
Csnk1g3Q8C4X2 Gm16148-201ENSMUST00000119653 893 ntBASIC28.64■■■□□ 2.18
Csnk1g3Q8C4X2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
Csnk1g3Q8C4X2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.63■■■□□ 2.17
Csnk1g3Q8C4X2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Csnk1g3Q8C4X2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Csnk1g3Q8C4X2 Peli2-204ENSMUST00000226513 1320 ntBASIC28.59■■■□□ 2.17
Csnk1g3Q8C4X2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Csnk1g3Q8C4X2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Csnk1g3Q8C4X2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Csnk1g3Q8C4X2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.55■■■□□ 2.16
Csnk1g3Q8C4X2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Csnk1g3Q8C4X2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Csnk1g3Q8C4X2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
Csnk1g3Q8C4X2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Csnk1g3Q8C4X2 Mipep-204ENSMUST00000225043 1548 ntBASIC28.51■■■□□ 2.15
Csnk1g3Q8C4X2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
Csnk1g3Q8C4X2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Csnk1g3Q8C4X2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
Csnk1g3Q8C4X2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Csnk1g3Q8C4X2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Csnk1g3Q8C4X2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.14
Csnk1g3Q8C4X2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Csnk1g3Q8C4X2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms