Protein–RNA interactions for Protein: Q8C4X2

Csnk1g3, Casein kinase I isoform gamma-3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1g3Q8C4X2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30,15■■■□□ 2,42
Csnk1g3Q8C4X2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30,13■■■□□ 2,41
Csnk1g3Q8C4X2 Gm42596-201ENSMUST00000196305 1958 ntBASIC30,11■■■□□ 2,41
Csnk1g3Q8C4X2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30,09■■■□□ 2,41
Csnk1g3Q8C4X2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30,05■■■□□ 2,4
Csnk1g3Q8C4X2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30,04■■■□□ 2,4
Csnk1g3Q8C4X2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30,01■■■□□ 2,39
Csnk1g3Q8C4X2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29,99■■■□□ 2,39
Csnk1g3Q8C4X2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29,94■■■□□ 2,38
Csnk1g3Q8C4X2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29,93■■■□□ 2,38
Csnk1g3Q8C4X2 Gm27322-201ENSMUST00000184007 104 ntBASIC29,92■■■□□ 2,38
Csnk1g3Q8C4X2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29,87■■■□□ 2,37
Csnk1g3Q8C4X2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29,87■■■□□ 2,37
Csnk1g3Q8C4X2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29,82■■■□□ 2,36
Csnk1g3Q8C4X2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29,81■■■□□ 2,36
Csnk1g3Q8C4X2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29,76■■■□□ 2,35
Csnk1g3Q8C4X2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29,7■■■□□ 2,35
Csnk1g3Q8C4X2 Gm24804-201ENSMUST00000174982 85 ntBASIC29,69■■■□□ 2,34
Csnk1g3Q8C4X2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29,65■■■□□ 2,34
Csnk1g3Q8C4X2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29,65■■■□□ 2,34
Csnk1g3Q8C4X2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29,58■■■□□ 2,33
Csnk1g3Q8C4X2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29,56■■■□□ 2,32
Csnk1g3Q8C4X2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29,55■■■□□ 2,32
Csnk1g3Q8C4X2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29,54■■■□□ 2,32
Csnk1g3Q8C4X2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29,54■■■□□ 2,32
Csnk1g3Q8C4X2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29,53■■■□□ 2,32
Csnk1g3Q8C4X2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29,5■■■□□ 2,31
Csnk1g3Q8C4X2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29,5■■■□□ 2,31
Csnk1g3Q8C4X2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29,42■■■□□ 2,3
Csnk1g3Q8C4X2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29,37■■■□□ 2,29
Csnk1g3Q8C4X2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29,36■■■□□ 2,29
Csnk1g3Q8C4X2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29,34■■■□□ 2,29
Csnk1g3Q8C4X2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29,34■■■□□ 2,29
Csnk1g3Q8C4X2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29,33■■■□□ 2,29
Csnk1g3Q8C4X2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29,28■■■□□ 2,28
Csnk1g3Q8C4X2 AC166822.3-201ENSMUST00000227394 661 ntBASIC29,28■■■□□ 2,28
Csnk1g3Q8C4X2 AL845457.1-201ENSMUST00000197244 68 ntBASIC29,25■■■□□ 2,27
Csnk1g3Q8C4X2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29,25■■■□□ 2,27
Csnk1g3Q8C4X2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29,24■■■□□ 2,27
Csnk1g3Q8C4X2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29,24■■■□□ 2,27
Csnk1g3Q8C4X2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29,22■■■□□ 2,27
Csnk1g3Q8C4X2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29,19■■■□□ 2,26
Csnk1g3Q8C4X2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29,18■■■□□ 2,26
Csnk1g3Q8C4X2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29,18■■■□□ 2,26
Csnk1g3Q8C4X2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29,17■■■□□ 2,26
Csnk1g3Q8C4X2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29,15■■■□□ 2,26
Csnk1g3Q8C4X2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29,12■■■□□ 2,25
Csnk1g3Q8C4X2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29,12■■■□□ 2,25
Csnk1g3Q8C4X2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29,12■■■□□ 2,25
Csnk1g3Q8C4X2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29,1■■■□□ 2,25
Csnk1g3Q8C4X2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29,08■■■□□ 2,25
Csnk1g3Q8C4X2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29,07■■■□□ 2,24
Csnk1g3Q8C4X2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29,06■■■□□ 2,24
Csnk1g3Q8C4X2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29,06■■■□□ 2,24
Csnk1g3Q8C4X2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29■■■□□ 2,23
Csnk1g3Q8C4X2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28,99■■■□□ 2,23
Csnk1g3Q8C4X2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28,98■■■□□ 2,23
Csnk1g3Q8C4X2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28,97■■■□□ 2,23
Csnk1g3Q8C4X2 Zfp131-205ENSMUST00000223812 663 ntBASIC28,97■■■□□ 2,23
Csnk1g3Q8C4X2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28,96■■■□□ 2,23
Csnk1g3Q8C4X2 Zfp131-207ENSMUST00000224946 1783 ntBASIC28,95■■■□□ 2,22
Csnk1g3Q8C4X2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28,93■■■□□ 2,22
Csnk1g3Q8C4X2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28,92■■■□□ 2,22
Csnk1g3Q8C4X2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28,87■■■□□ 2,21
Csnk1g3Q8C4X2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28,85■■■□□ 2,21
Csnk1g3Q8C4X2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28,85■■■□□ 2,21
Csnk1g3Q8C4X2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28,8■■■□□ 2,2
Csnk1g3Q8C4X2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28,76■■■□□ 2,19
Csnk1g3Q8C4X2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28,75■■■□□ 2,19
Csnk1g3Q8C4X2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28,75■■■□□ 2,19
Csnk1g3Q8C4X2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28,73■■■□□ 2,19
Csnk1g3Q8C4X2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28,7■■■□□ 2,18
Csnk1g3Q8C4X2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28,66■■■□□ 2,18
Csnk1g3Q8C4X2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28,66■■■□□ 2,18
Csnk1g3Q8C4X2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28,65■■■□□ 2,18
Csnk1g3Q8C4X2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28,65■■■□□ 2,18
Csnk1g3Q8C4X2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28,64■■■□□ 2,18
Csnk1g3Q8C4X2 Gm16148-201ENSMUST00000119653 893 ntBASIC28,64■■■□□ 2,18
Csnk1g3Q8C4X2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28,63■■■□□ 2,17
Csnk1g3Q8C4X2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28,63■■■□□ 2,17
Csnk1g3Q8C4X2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28,61■■■□□ 2,17
Csnk1g3Q8C4X2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28,61■■■□□ 2,17
Csnk1g3Q8C4X2 Peli2-204ENSMUST00000226513 1320 ntBASIC28,59■■■□□ 2,17
Csnk1g3Q8C4X2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28,59■■■□□ 2,17
Csnk1g3Q8C4X2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28,58■■■□□ 2,17
Csnk1g3Q8C4X2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28,57■■■□□ 2,16
Csnk1g3Q8C4X2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28,55■■■□□ 2,16
Csnk1g3Q8C4X2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28,54■■■□□ 2,16
Csnk1g3Q8C4X2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28,54■■■□□ 2,16
Csnk1g3Q8C4X2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28,53■■■□□ 2,16
Csnk1g3Q8C4X2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28,52■■■□□ 2,16
Csnk1g3Q8C4X2 Mipep-204ENSMUST00000225043 1548 ntBASIC28,51■■■□□ 2,15
Csnk1g3Q8C4X2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28,51■■■□□ 2,15
Csnk1g3Q8C4X2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28,48■■■□□ 2,15
Csnk1g3Q8C4X2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28,48■■■□□ 2,15
Csnk1g3Q8C4X2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28,46■■■□□ 2,15
Csnk1g3Q8C4X2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28,44■■■□□ 2,14
Csnk1g3Q8C4X2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28,39■■■□□ 2,14
Csnk1g3Q8C4X2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28,37■■■□□ 2,13
Csnk1g3Q8C4X2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28,37■■■□□ 2,13
Retrieved 100 of 76,532 protein–RNA pairs in 35,2 ms