Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC39.45■■■■□ 3.91
Cps1Q8C196 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC39.45■■■■□ 3.91
Cps1Q8C196 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
Cps1Q8C196 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
Cps1Q8C196 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC39.35■■■■□ 3.89
Cps1Q8C196 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.89
Cps1Q8C196 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.88
Cps1Q8C196 Gm27322-201ENSMUST00000184007 104 ntBASIC39.31■■■■□ 3.88
Cps1Q8C196 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
Cps1Q8C196 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
Cps1Q8C196 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
Cps1Q8C196 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
Cps1Q8C196 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
Cps1Q8C196 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC39.16■■■■□ 3.86
Cps1Q8C196 Gm42596-201ENSMUST00000196305 1958 ntBASIC39.16■■■■□ 3.86
Cps1Q8C196 Gm10524-201ENSMUST00000181931 1893 ntBASIC39.1■■■■□ 3.85
Cps1Q8C196 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
Cps1Q8C196 CT025624.2-201ENSMUST00000223609 1909 ntBASIC38.97■■■■□ 3.83
Cps1Q8C196 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
Cps1Q8C196 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Cps1Q8C196 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC38.81■■■■□ 3.8
Cps1Q8C196 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC38.81■■■■□ 3.8
Cps1Q8C196 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC38.79■■■■□ 3.8
Cps1Q8C196 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC38.79■■■■□ 3.8
Cps1Q8C196 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC38.76■■■■□ 3.8
Cps1Q8C196 Zfp131-205ENSMUST00000223812 663 ntBASIC38.71■■■■□ 3.79
Cps1Q8C196 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC38.69■■■■□ 3.78
Cps1Q8C196 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
Cps1Q8C196 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
Cps1Q8C196 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
Cps1Q8C196 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC38.63■■■■□ 3.77
Cps1Q8C196 AC166822.3-201ENSMUST00000227394 661 ntBASIC38.63■■■■□ 3.77
Cps1Q8C196 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
Cps1Q8C196 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC38.61■■■■□ 3.77
Cps1Q8C196 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
Cps1Q8C196 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC38.59■■■■□ 3.77
Cps1Q8C196 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC38.59■■■■□ 3.77
Cps1Q8C196 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
Cps1Q8C196 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC38.53■■■■□ 3.76
Cps1Q8C196 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC38.51■■■■□ 3.76
Cps1Q8C196 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC38.5■■■■□ 3.75
Cps1Q8C196 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC38.48■■■■□ 3.75
Cps1Q8C196 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC38.44■■■■□ 3.74
Cps1Q8C196 AL845457.1-201ENSMUST00000197244 68 ntBASIC38.44■■■■□ 3.74
Cps1Q8C196 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC38.42■■■■□ 3.74
Cps1Q8C196 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC38.35■■■■□ 3.73
Cps1Q8C196 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC38.34■■■■□ 3.73
Cps1Q8C196 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC38.31■■■■□ 3.72
Cps1Q8C196 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC38.26■■■■□ 3.72
Cps1Q8C196 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
Cps1Q8C196 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC38.15■■■■□ 3.7
Cps1Q8C196 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC38.1■■■■□ 3.69
Cps1Q8C196 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
Cps1Q8C196 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC38.08■■■■□ 3.69
Cps1Q8C196 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC38.07■■■■□ 3.69
Cps1Q8C196 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC38.07■■■■□ 3.68
Cps1Q8C196 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC38.07■■■■□ 3.68
Cps1Q8C196 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC38.05■■■■□ 3.68
Cps1Q8C196 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC38.04■■■■□ 3.68
Cps1Q8C196 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
Cps1Q8C196 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC38.01■■■■□ 3.68
Cps1Q8C196 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
Cps1Q8C196 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC37.99■■■■□ 3.67
Cps1Q8C196 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
Cps1Q8C196 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC37.9■■■■□ 3.66
Cps1Q8C196 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC37.9■■■■□ 3.66
Cps1Q8C196 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
Cps1Q8C196 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
Cps1Q8C196 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
Cps1Q8C196 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
Cps1Q8C196 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
Cps1Q8C196 Zfp131-207ENSMUST00000224946 1783 ntBASIC37.8■■■■□ 3.64
Cps1Q8C196 Gm16148-201ENSMUST00000119653 893 ntBASIC37.75■■■■□ 3.63
Cps1Q8C196 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC37.73■■■■□ 3.63
Cps1Q8C196 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC37.71■■■■□ 3.63
Cps1Q8C196 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC37.68■■■■□ 3.62
Cps1Q8C196 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC37.66■■■■□ 3.62
Cps1Q8C196 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC37.64■■■■□ 3.62
Cps1Q8C196 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
Cps1Q8C196 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC37.61■■■■□ 3.61
Cps1Q8C196 Peli2-204ENSMUST00000226513 1320 ntBASIC37.6■■■■□ 3.61
Cps1Q8C196 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC37.59■■■■□ 3.61
Cps1Q8C196 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC37.57■■■■□ 3.61
Cps1Q8C196 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC37.56■■■■□ 3.6
Cps1Q8C196 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
Cps1Q8C196 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC37.56■■■■□ 3.6
Cps1Q8C196 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC37.56■■■■□ 3.6
Cps1Q8C196 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
Cps1Q8C196 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC37.46■■■■□ 3.59
Cps1Q8C196 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
Cps1Q8C196 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
Cps1Q8C196 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC37.43■■■■□ 3.58
Cps1Q8C196 Tdp2-203ENSMUST00000223804 1136 ntBASIC37.43■■■■□ 3.58
Cps1Q8C196 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC37.41■■■■□ 3.58
Cps1Q8C196 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC37.38■■■■□ 3.57
Cps1Q8C196 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC37.38■■■■□ 3.57
Cps1Q8C196 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC37.37■■■■□ 3.57
Cps1Q8C196 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC37.35■■■■□ 3.57
Cps1Q8C196 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC37.33■■■■□ 3.57
Cps1Q8C196 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC37.27■■■■□ 3.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms