Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC39,45■■■■□ 3,91
Cps1Q8C196 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC39,45■■■■□ 3,91
Cps1Q8C196 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC39,45■■■■□ 3,91
Cps1Q8C196 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC39,37■■■■□ 3,89
Cps1Q8C196 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC39,35■■■■□ 3,89
Cps1Q8C196 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC39,32■■■■□ 3,89
Cps1Q8C196 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC39,32■■■■□ 3,88
Cps1Q8C196 Gm27322-201ENSMUST00000184007 104 ntBASIC39,31■■■■□ 3,88
Cps1Q8C196 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC39,3■■■■□ 3,88
Cps1Q8C196 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC39,27■■■■□ 3,88
Cps1Q8C196 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC39,24■■■■□ 3,87
Cps1Q8C196 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC39,23■■■■□ 3,87
Cps1Q8C196 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC39,2■■■■□ 3,87
Cps1Q8C196 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC39,16■■■■□ 3,86
Cps1Q8C196 Gm42596-201ENSMUST00000196305 1958 ntBASIC39,16■■■■□ 3,86
Cps1Q8C196 Gm10524-201ENSMUST00000181931 1893 ntBASIC39,1■■■■□ 3,85
Cps1Q8C196 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC38,99■■■■□ 3,83
Cps1Q8C196 CT025624.2-201ENSMUST00000223609 1909 ntBASIC38,97■■■■□ 3,83
Cps1Q8C196 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC38,89■■■■□ 3,82
Cps1Q8C196 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC38,86■■■■□ 3,81
Cps1Q8C196 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC38,81■■■■□ 3,8
Cps1Q8C196 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC38,81■■■■□ 3,8
Cps1Q8C196 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC38,79■■■■□ 3,8
Cps1Q8C196 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC38,79■■■■□ 3,8
Cps1Q8C196 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC38,76■■■■□ 3,8
Cps1Q8C196 Zfp131-205ENSMUST00000223812 663 ntBASIC38,71■■■■□ 3,79
Cps1Q8C196 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC38,69■■■■□ 3,78
Cps1Q8C196 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC38,68■■■■□ 3,78
Cps1Q8C196 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC38,68■■■■□ 3,78
Cps1Q8C196 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC38,65■■■■□ 3,78
Cps1Q8C196 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC38,63■■■■□ 3,77
Cps1Q8C196 AC166822.3-201ENSMUST00000227394 661 ntBASIC38,63■■■■□ 3,77
Cps1Q8C196 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC38,62■■■■□ 3,77
Cps1Q8C196 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC38,61■■■■□ 3,77
Cps1Q8C196 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC38,6■■■■□ 3,77
Cps1Q8C196 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC38,59■■■■□ 3,77
Cps1Q8C196 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC38,59■■■■□ 3,77
Cps1Q8C196 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC38,59■■■■□ 3,77
Cps1Q8C196 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC38,53■■■■□ 3,76
Cps1Q8C196 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC38,51■■■■□ 3,76
Cps1Q8C196 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC38,5■■■■□ 3,75
Cps1Q8C196 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC38,48■■■■□ 3,75
Cps1Q8C196 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC38,44■■■■□ 3,74
Cps1Q8C196 AL845457.1-201ENSMUST00000197244 68 ntBASIC38,44■■■■□ 3,74
Cps1Q8C196 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC38,42■■■■□ 3,74
Cps1Q8C196 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC38,35■■■■□ 3,73
Cps1Q8C196 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC38,34■■■■□ 3,73
Cps1Q8C196 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC38,31■■■■□ 3,72
Cps1Q8C196 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC38,26■■■■□ 3,72
Cps1Q8C196 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC38,24■■■■□ 3,71
Cps1Q8C196 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC38,15■■■■□ 3,7
Cps1Q8C196 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC38,1■■■■□ 3,69
Cps1Q8C196 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC38,09■■■■□ 3,69
Cps1Q8C196 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC38,08■■■■□ 3,69
Cps1Q8C196 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC38,07■■■■□ 3,69
Cps1Q8C196 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC38,07■■■■□ 3,68
Cps1Q8C196 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC38,07■■■■□ 3,68
Cps1Q8C196 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC38,05■■■■□ 3,68
Cps1Q8C196 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC38,04■■■■□ 3,68
Cps1Q8C196 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC38,03■■■■□ 3,68
Cps1Q8C196 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC38,01■■■■□ 3,68
Cps1Q8C196 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3,67
Cps1Q8C196 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC37,99■■■■□ 3,67
Cps1Q8C196 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC37,96■■■■□ 3,67
Cps1Q8C196 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC37,9■■■■□ 3,66
Cps1Q8C196 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC37,9■■■■□ 3,66
Cps1Q8C196 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC37,87■■■■□ 3,65
Cps1Q8C196 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC37,84■■■■□ 3,65
Cps1Q8C196 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC37,84■■■■□ 3,65
Cps1Q8C196 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC37,84■■■■□ 3,65
Cps1Q8C196 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC37,84■■■■□ 3,65
Cps1Q8C196 Zfp131-207ENSMUST00000224946 1783 ntBASIC37,8■■■■□ 3,64
Cps1Q8C196 Gm16148-201ENSMUST00000119653 893 ntBASIC37,75■■■■□ 3,63
Cps1Q8C196 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC37,73■■■■□ 3,63
Cps1Q8C196 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC37,71■■■■□ 3,63
Cps1Q8C196 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC37,68■■■■□ 3,62
Cps1Q8C196 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC37,66■■■■□ 3,62
Cps1Q8C196 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC37,64■■■■□ 3,62
Cps1Q8C196 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC37,64■■■■□ 3,62
Cps1Q8C196 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC37,61■■■■□ 3,61
Cps1Q8C196 Peli2-204ENSMUST00000226513 1320 ntBASIC37,6■■■■□ 3,61
Cps1Q8C196 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC37,59■■■■□ 3,61
Cps1Q8C196 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC37,57■■■■□ 3,61
Cps1Q8C196 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC37,56■■■■□ 3,6
Cps1Q8C196 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC37,56■■■■□ 3,6
Cps1Q8C196 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC37,56■■■■□ 3,6
Cps1Q8C196 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC37,56■■■■□ 3,6
Cps1Q8C196 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC37,48■■■■□ 3,59
Cps1Q8C196 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC37,46■■■■□ 3,59
Cps1Q8C196 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC37,46■■■■□ 3,59
Cps1Q8C196 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC37,46■■■■□ 3,59
Cps1Q8C196 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC37,43■■■■□ 3,58
Cps1Q8C196 Tdp2-203ENSMUST00000223804 1136 ntBASIC37,43■■■■□ 3,58
Cps1Q8C196 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC37,41■■■■□ 3,58
Cps1Q8C196 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC37,38■■■■□ 3,57
Cps1Q8C196 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC37,38■■■■□ 3,57
Cps1Q8C196 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC37,37■■■■□ 3,57
Cps1Q8C196 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC37,35■■■■□ 3,57
Cps1Q8C196 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC37,33■■■■□ 3,57
Cps1Q8C196 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC37,27■■■■□ 3,56
Retrieved 100 of 76,532 protein–RNA pairs in 11,5 ms