Protein–RNA interactions for Protein: Q8BYI9

Tnr, Tenascin-R, mousemouse

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnrQ8BYI9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC37,71■■■■□ 3,63
TnrQ8BYI9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC37,67■■■■□ 3,62
TnrQ8BYI9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC37,65■■■■□ 3,62
TnrQ8BYI9 Gm24804-201ENSMUST00000174982 85 ntBASIC37,65■■■■□ 3,62
TnrQ8BYI9 Gm27322-201ENSMUST00000184007 104 ntBASIC37,64■■■■□ 3,62
TnrQ8BYI9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC37,61■■■■□ 3,61
TnrQ8BYI9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC37,6■■■■□ 3,61
TnrQ8BYI9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC37,58■■■■□ 3,61
TnrQ8BYI9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC37,55■■■■□ 3,6
TnrQ8BYI9 Gm10524-201ENSMUST00000181931 1893 ntBASIC37,49■■■■□ 3,59
TnrQ8BYI9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC37,47■■■■□ 3,59
TnrQ8BYI9 Gm42596-201ENSMUST00000196305 1958 ntBASIC37,44■■■■□ 3,58
TnrQ8BYI9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC37,44■■■■□ 3,58
TnrQ8BYI9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC37,39■■■■□ 3,58
TnrQ8BYI9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC37,36■■■■□ 3,57
TnrQ8BYI9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC37,35■■■■□ 3,57
TnrQ8BYI9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC37,32■■■■□ 3,57
TnrQ8BYI9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC37,28■■■■□ 3,56
TnrQ8BYI9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC37,24■■■■□ 3,55
TnrQ8BYI9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC37,18■■■■□ 3,54
TnrQ8BYI9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC37,07■■■■□ 3,52
TnrQ8BYI9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC37,05■■■■□ 3,52
TnrQ8BYI9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC37■■■■□ 3,51
TnrQ8BYI9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC36,98■■■■□ 3,51
TnrQ8BYI9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC36,95■■■■□ 3,51
TnrQ8BYI9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC36,94■■■■□ 3,5
TnrQ8BYI9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC36,93■■■■□ 3,5
TnrQ8BYI9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC36,92■■■■□ 3,5
TnrQ8BYI9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC36,91■■■■□ 3,5
TnrQ8BYI9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC36,9■■■■□ 3,5
TnrQ8BYI9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC36,89■■■■□ 3,5
TnrQ8BYI9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC36,89■■■■□ 3,5
TnrQ8BYI9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC36,86■■■■□ 3,49
TnrQ8BYI9 Zfp131-205ENSMUST00000223812 663 ntBASIC36,84■■■■□ 3,49
TnrQ8BYI9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC36,84■■■■□ 3,49
TnrQ8BYI9 AC166822.3-201ENSMUST00000227394 661 ntBASIC36,83■■■■□ 3,49
TnrQ8BYI9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC36,82■■■■□ 3,48
TnrQ8BYI9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC36,81■■■■□ 3,48
TnrQ8BYI9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC36,78■■■■□ 3,48
TnrQ8BYI9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC36,77■■■■□ 3,48
TnrQ8BYI9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC36,76■■■■□ 3,47
TnrQ8BYI9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC36,74■■■■□ 3,47
TnrQ8BYI9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC36,71■■■■□ 3,47
TnrQ8BYI9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC36,7■■■■□ 3,47
TnrQ8BYI9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC36,69■■■■□ 3,46
TnrQ8BYI9 AL845457.1-201ENSMUST00000197244 68 ntBASIC36,68■■■■□ 3,46
TnrQ8BYI9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC36,62■■■■□ 3,45
TnrQ8BYI9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC36,53■■■■□ 3,44
TnrQ8BYI9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC36,51■■■■□ 3,43
TnrQ8BYI9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC36,44■■■■□ 3,42
TnrQ8BYI9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC36,4■■■■□ 3,42
TnrQ8BYI9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC36,4■■■■□ 3,42
TnrQ8BYI9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC36,39■■■■□ 3,42
TnrQ8BYI9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC36,38■■■■□ 3,41
TnrQ8BYI9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC36,37■■■■□ 3,41
TnrQ8BYI9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC36,35■■■■□ 3,41
TnrQ8BYI9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC36,33■■■■□ 3,41
TnrQ8BYI9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC36,29■■■■□ 3,4
TnrQ8BYI9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC36,29■■■■□ 3,4
TnrQ8BYI9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC36,27■■■■□ 3,4
TnrQ8BYI9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC36,27■■■■□ 3,4
TnrQ8BYI9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC36,25■■■■□ 3,39
TnrQ8BYI9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC36,24■■■■□ 3,39
TnrQ8BYI9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC36,24■■■■□ 3,39
TnrQ8BYI9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC36,23■■■■□ 3,39
TnrQ8BYI9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC36,23■■■■□ 3,39
TnrQ8BYI9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC36,21■■■■□ 3,39
TnrQ8BYI9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC36,2■■■■□ 3,39
TnrQ8BYI9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC36,15■■■■□ 3,38
TnrQ8BYI9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC36,14■■■■□ 3,38
TnrQ8BYI9 Zfp131-207ENSMUST00000224946 1783 ntBASIC36,09■■■■□ 3,37
TnrQ8BYI9 Gm16148-201ENSMUST00000119653 893 ntBASIC36,06■■■■□ 3,36
TnrQ8BYI9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC36,05■■■■□ 3,36
TnrQ8BYI9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC36,02■■■■□ 3,36
TnrQ8BYI9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC35,98■■■■□ 3,35
TnrQ8BYI9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC35,96■■■■□ 3,35
TnrQ8BYI9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC35,93■■■■□ 3,34
TnrQ8BYI9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC35,92■■■■□ 3,34
TnrQ8BYI9 Peli2-204ENSMUST00000226513 1320 ntBASIC35,91■■■■□ 3,34
TnrQ8BYI9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC35,9■■■■□ 3,34
TnrQ8BYI9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC35,88■■■■□ 3,33
TnrQ8BYI9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC35,87■■■■□ 3,33
TnrQ8BYI9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC35,85■■■■□ 3,33
TnrQ8BYI9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC35,82■■■■□ 3,32
TnrQ8BYI9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC35,82■■■■□ 3,32
TnrQ8BYI9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC35,81■■■■□ 3,32
TnrQ8BYI9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC35,8■■■■□ 3,32
TnrQ8BYI9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC35,78■■■■□ 3,32
TnrQ8BYI9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC35,78■■■■□ 3,32
TnrQ8BYI9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC35,77■■■■□ 3,32
TnrQ8BYI9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC35,76■■■■□ 3,31
TnrQ8BYI9 Tdp2-203ENSMUST00000223804 1136 ntBASIC35,75■■■■□ 3,31
TnrQ8BYI9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC35,72■■■■□ 3,31
TnrQ8BYI9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC35,71■■■■□ 3,31
TnrQ8BYI9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC35,68■■■■□ 3,3
TnrQ8BYI9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC35,66■■■■□ 3,3
TnrQ8BYI9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC35,66■■■■□ 3,3
TnrQ8BYI9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC35,66■■■■□ 3,3
TnrQ8BYI9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC35,65■■■■□ 3,3
TnrQ8BYI9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC35,61■■■■□ 3,29
Retrieved 100 of 76,532 protein–RNA pairs in 29,4 ms