Protein–RNA interactions for Protein: Q8BMC3

Shc2, SHC-transforming protein 2, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc2Q8BMC3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Shc2Q8BMC3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Shc2Q8BMC3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Shc2Q8BMC3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.31■■■□□ 2.28
Shc2Q8BMC3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.26■■■□□ 2.28
Shc2Q8BMC3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
Shc2Q8BMC3 Gm24804-201ENSMUST00000174982 85 ntBASIC29.23■■■□□ 2.27
Shc2Q8BMC3 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.21■■■□□ 2.27
Shc2Q8BMC3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Shc2Q8BMC3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Shc2Q8BMC3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Shc2Q8BMC3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Shc2Q8BMC3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Shc2Q8BMC3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Shc2Q8BMC3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Shc2Q8BMC3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.93■■■□□ 2.22
Shc2Q8BMC3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Shc2Q8BMC3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Shc2Q8BMC3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
Shc2Q8BMC3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.87■■■□□ 2.21
Shc2Q8BMC3 Gm27322-201ENSMUST00000184007 104 ntBASIC28.85■■■□□ 2.21
Shc2Q8BMC3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Shc2Q8BMC3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.82■■■□□ 2.2
Shc2Q8BMC3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.82■■■□□ 2.2
Shc2Q8BMC3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
Shc2Q8BMC3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Shc2Q8BMC3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Shc2Q8BMC3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Shc2Q8BMC3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Shc2Q8BMC3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Shc2Q8BMC3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Shc2Q8BMC3 Zfp131-205ENSMUST00000223812 663 ntBASIC28.68■■■□□ 2.18
Shc2Q8BMC3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Shc2Q8BMC3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Shc2Q8BMC3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Shc2Q8BMC3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Shc2Q8BMC3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Shc2Q8BMC3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Shc2Q8BMC3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
Shc2Q8BMC3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Shc2Q8BMC3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.56■■■□□ 2.16
Shc2Q8BMC3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Shc2Q8BMC3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.55■■■□□ 2.16
Shc2Q8BMC3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.52■■■□□ 2.16
Shc2Q8BMC3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.5■■■□□ 2.15
Shc2Q8BMC3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Shc2Q8BMC3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Shc2Q8BMC3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.42■■■□□ 2.14
Shc2Q8BMC3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Shc2Q8BMC3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Shc2Q8BMC3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Shc2Q8BMC3 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.39■■■□□ 2.14
Shc2Q8BMC3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Shc2Q8BMC3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Shc2Q8BMC3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Shc2Q8BMC3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Shc2Q8BMC3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Shc2Q8BMC3 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.33■■■□□ 2.13
Shc2Q8BMC3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
Shc2Q8BMC3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Shc2Q8BMC3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Shc2Q8BMC3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.25■■■□□ 2.11
Shc2Q8BMC3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Shc2Q8BMC3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Shc2Q8BMC3 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.22■■■□□ 2.11
Shc2Q8BMC3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Shc2Q8BMC3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Shc2Q8BMC3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Shc2Q8BMC3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
Shc2Q8BMC3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Shc2Q8BMC3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Shc2Q8BMC3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.01■■■□□ 2.07
Shc2Q8BMC3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Shc2Q8BMC3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28■■■□□ 2.07
Shc2Q8BMC3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28■■■□□ 2.07
Shc2Q8BMC3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Shc2Q8BMC3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
Shc2Q8BMC3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Shc2Q8BMC3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Shc2Q8BMC3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Shc2Q8BMC3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Shc2Q8BMC3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.92■■■□□ 2.06
Shc2Q8BMC3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.88■■■□□ 2.05
Shc2Q8BMC3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Shc2Q8BMC3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Shc2Q8BMC3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Shc2Q8BMC3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Shc2Q8BMC3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
Shc2Q8BMC3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.76■■■□□ 2.03
Shc2Q8BMC3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.76■■■□□ 2.03
Shc2Q8BMC3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Shc2Q8BMC3 Mipep-204ENSMUST00000225043 1548 ntBASIC27.74■■■□□ 2.03
Shc2Q8BMC3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Shc2Q8BMC3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
Shc2Q8BMC3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Shc2Q8BMC3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
Shc2Q8BMC3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
Shc2Q8BMC3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Shc2Q8BMC3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Shc2Q8BMC3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms