Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Hmbox1Q8BJA3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
Hmbox1Q8BJA3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Hmbox1Q8BJA3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Hmbox1Q8BJA3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Hmbox1Q8BJA3 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.7■■□□□ 1.86
Hmbox1Q8BJA3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.7■■□□□ 1.86
Hmbox1Q8BJA3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.7■■□□□ 1.86
Hmbox1Q8BJA3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Hmbox1Q8BJA3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Hmbox1Q8BJA3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Hmbox1Q8BJA3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
Hmbox1Q8BJA3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Hmbox1Q8BJA3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.55■■□□□ 1.84
Hmbox1Q8BJA3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
Hmbox1Q8BJA3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Hmbox1Q8BJA3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.48■■□□□ 1.83
Hmbox1Q8BJA3 Gm27322-201ENSMUST00000184007 104 ntBASIC26.47■■□□□ 1.83
Hmbox1Q8BJA3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.46■■□□□ 1.83
Hmbox1Q8BJA3 Zfp131-205ENSMUST00000223812 663 ntBASIC26.44■■□□□ 1.82
Hmbox1Q8BJA3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Hmbox1Q8BJA3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Hmbox1Q8BJA3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Hmbox1Q8BJA3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Hmbox1Q8BJA3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Hmbox1Q8BJA3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Hmbox1Q8BJA3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Hmbox1Q8BJA3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Hmbox1Q8BJA3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Hmbox1Q8BJA3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.35■■□□□ 1.81
Hmbox1Q8BJA3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Hmbox1Q8BJA3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Hmbox1Q8BJA3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.31■■□□□ 1.8
Hmbox1Q8BJA3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Hmbox1Q8BJA3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Hmbox1Q8BJA3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Hmbox1Q8BJA3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hmbox1Q8BJA3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Hmbox1Q8BJA3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.25■■□□□ 1.79
Hmbox1Q8BJA3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hmbox1Q8BJA3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.24■■□□□ 1.79
Hmbox1Q8BJA3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hmbox1Q8BJA3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hmbox1Q8BJA3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hmbox1Q8BJA3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hmbox1Q8BJA3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.16■■□□□ 1.78
Hmbox1Q8BJA3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Hmbox1Q8BJA3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Hmbox1Q8BJA3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Hmbox1Q8BJA3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Hmbox1Q8BJA3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Hmbox1Q8BJA3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Hmbox1Q8BJA3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.06■■□□□ 1.76
Hmbox1Q8BJA3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.06■■□□□ 1.76
Hmbox1Q8BJA3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.05■■□□□ 1.76
Hmbox1Q8BJA3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Hmbox1Q8BJA3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.01■■□□□ 1.75
Hmbox1Q8BJA3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Hmbox1Q8BJA3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
Hmbox1Q8BJA3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Hmbox1Q8BJA3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Hmbox1Q8BJA3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Hmbox1Q8BJA3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Hmbox1Q8BJA3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Hmbox1Q8BJA3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Hmbox1Q8BJA3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Hmbox1Q8BJA3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.83■■□□□ 1.73
Hmbox1Q8BJA3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Hmbox1Q8BJA3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Hmbox1Q8BJA3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Hmbox1Q8BJA3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Hmbox1Q8BJA3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.79■■□□□ 1.72
Hmbox1Q8BJA3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Hmbox1Q8BJA3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.76■■□□□ 1.71
Hmbox1Q8BJA3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Hmbox1Q8BJA3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Hmbox1Q8BJA3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Hmbox1Q8BJA3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Hmbox1Q8BJA3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Hmbox1Q8BJA3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Hmbox1Q8BJA3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.67■■□□□ 1.7
Hmbox1Q8BJA3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Hmbox1Q8BJA3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Hmbox1Q8BJA3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Hmbox1Q8BJA3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Hmbox1Q8BJA3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Hmbox1Q8BJA3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.63■■□□□ 1.69
Hmbox1Q8BJA3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.63■■□□□ 1.69
Hmbox1Q8BJA3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Hmbox1Q8BJA3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Hmbox1Q8BJA3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Hmbox1Q8BJA3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.52■■□□□ 1.68
Hmbox1Q8BJA3 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.49■■□□□ 1.67
Hmbox1Q8BJA3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hmbox1Q8BJA3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Hmbox1Q8BJA3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Hmbox1Q8BJA3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Hmbox1Q8BJA3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Hmbox1Q8BJA3 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.43■■□□□ 1.66
Hmbox1Q8BJA3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms