Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26,8■■□□□ 1,88
Hmbox1Q8BJA3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26,79■■□□□ 1,88
Hmbox1Q8BJA3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26,77■■□□□ 1,88
Hmbox1Q8BJA3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26,77■■□□□ 1,88
Hmbox1Q8BJA3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26,76■■□□□ 1,87
Hmbox1Q8BJA3 Gm17082-201ENSMUST00000166043 1091 ntBASIC26,7■■□□□ 1,86
Hmbox1Q8BJA3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26,7■■□□□ 1,86
Hmbox1Q8BJA3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26,7■■□□□ 1,86
Hmbox1Q8BJA3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26,66■■□□□ 1,86
Hmbox1Q8BJA3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26,63■■□□□ 1,85
Hmbox1Q8BJA3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26,62■■□□□ 1,85
Hmbox1Q8BJA3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26,61■■□□□ 1,85
Hmbox1Q8BJA3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26,61■■□□□ 1,85
Hmbox1Q8BJA3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26,55■■□□□ 1,84
Hmbox1Q8BJA3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26,5■■□□□ 1,83
Hmbox1Q8BJA3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26,5■■□□□ 1,83
Hmbox1Q8BJA3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26,48■■□□□ 1,83
Hmbox1Q8BJA3 Gm27322-201ENSMUST00000184007 104 ntBASIC26,47■■□□□ 1,83
Hmbox1Q8BJA3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26,46■■□□□ 1,83
Hmbox1Q8BJA3 Zfp131-205ENSMUST00000223812 663 ntBASIC26,44■■□□□ 1,82
Hmbox1Q8BJA3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Hmbox1Q8BJA3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26,42■■□□□ 1,82
Hmbox1Q8BJA3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26,4■■□□□ 1,82
Hmbox1Q8BJA3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26,4■■□□□ 1,82
Hmbox1Q8BJA3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26,39■■□□□ 1,82
Hmbox1Q8BJA3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,82
Hmbox1Q8BJA3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26,38■■□□□ 1,81
Hmbox1Q8BJA3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26,36■■□□□ 1,81
Hmbox1Q8BJA3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26,36■■□□□ 1,81
Hmbox1Q8BJA3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26,35■■□□□ 1,81
Hmbox1Q8BJA3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26,33■■□□□ 1,81
Hmbox1Q8BJA3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26,33■■□□□ 1,81
Hmbox1Q8BJA3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26,31■■□□□ 1,8
Hmbox1Q8BJA3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26,31■■□□□ 1,8
Hmbox1Q8BJA3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26,3■■□□□ 1,8
Hmbox1Q8BJA3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26,3■■□□□ 1,8
Hmbox1Q8BJA3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26,28■■□□□ 1,8
Hmbox1Q8BJA3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26,27■■□□□ 1,8
Hmbox1Q8BJA3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26,25■■□□□ 1,79
Hmbox1Q8BJA3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26,25■■□□□ 1,79
Hmbox1Q8BJA3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26,24■■□□□ 1,79
Hmbox1Q8BJA3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26,24■■□□□ 1,79
Hmbox1Q8BJA3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26,24■■□□□ 1,79
Hmbox1Q8BJA3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26,24■■□□□ 1,79
Hmbox1Q8BJA3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26,23■■□□□ 1,79
Hmbox1Q8BJA3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26,16■■□□□ 1,78
Hmbox1Q8BJA3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26,15■■□□□ 1,78
Hmbox1Q8BJA3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26,14■■□□□ 1,78
Hmbox1Q8BJA3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26,12■■□□□ 1,77
Hmbox1Q8BJA3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26,1■■□□□ 1,77
Hmbox1Q8BJA3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26,09■■□□□ 1,77
Hmbox1Q8BJA3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26,08■■□□□ 1,77
Hmbox1Q8BJA3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26,06■■□□□ 1,76
Hmbox1Q8BJA3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26,06■■□□□ 1,76
Hmbox1Q8BJA3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26,05■■□□□ 1,76
Hmbox1Q8BJA3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26,03■■□□□ 1,76
Hmbox1Q8BJA3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26,01■■□□□ 1,75
Hmbox1Q8BJA3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1,75
Hmbox1Q8BJA3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25,99■■□□□ 1,75
Hmbox1Q8BJA3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25,96■■□□□ 1,75
Hmbox1Q8BJA3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25,93■■□□□ 1,74
Hmbox1Q8BJA3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25,92■■□□□ 1,74
Hmbox1Q8BJA3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25,89■■□□□ 1,74
Hmbox1Q8BJA3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25,88■■□□□ 1,73
Hmbox1Q8BJA3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25,87■■□□□ 1,73
Hmbox1Q8BJA3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25,86■■□□□ 1,73
Hmbox1Q8BJA3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25,83■■□□□ 1,73
Hmbox1Q8BJA3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25,81■■□□□ 1,72
Hmbox1Q8BJA3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25,81■■□□□ 1,72
Hmbox1Q8BJA3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25,81■■□□□ 1,72
Hmbox1Q8BJA3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25,81■■□□□ 1,72
Hmbox1Q8BJA3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25,79■■□□□ 1,72
Hmbox1Q8BJA3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25,77■■□□□ 1,72
Hmbox1Q8BJA3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25,76■■□□□ 1,71
Hmbox1Q8BJA3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
Hmbox1Q8BJA3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25,75■■□□□ 1,71
Hmbox1Q8BJA3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25,73■■□□□ 1,71
Hmbox1Q8BJA3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25,73■■□□□ 1,71
Hmbox1Q8BJA3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25,69■■□□□ 1,7
Hmbox1Q8BJA3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25,67■■□□□ 1,7
Hmbox1Q8BJA3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25,67■■□□□ 1,7
Hmbox1Q8BJA3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25,66■■□□□ 1,7
Hmbox1Q8BJA3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25,66■■□□□ 1,7
Hmbox1Q8BJA3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25,66■■□□□ 1,7
Hmbox1Q8BJA3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25,66■■□□□ 1,7
Hmbox1Q8BJA3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25,65■■□□□ 1,7
Hmbox1Q8BJA3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25,63■■□□□ 1,69
Hmbox1Q8BJA3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25,63■■□□□ 1,69
Hmbox1Q8BJA3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25,55■■□□□ 1,68
Hmbox1Q8BJA3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25,54■■□□□ 1,68
Hmbox1Q8BJA3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25,54■■□□□ 1,68
Hmbox1Q8BJA3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25,52■■□□□ 1,68
Hmbox1Q8BJA3 Tdp2-203ENSMUST00000223804 1136 ntBASIC25,49■■□□□ 1,67
Hmbox1Q8BJA3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25,48■■□□□ 1,67
Hmbox1Q8BJA3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25,46■■□□□ 1,67
Hmbox1Q8BJA3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25,46■■□□□ 1,67
Hmbox1Q8BJA3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25,45■■□□□ 1,66
Hmbox1Q8BJA3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Hmbox1Q8BJA3 AC166822.3-201ENSMUST00000227394 661 ntBASIC25,43■■□□□ 1,66
Hmbox1Q8BJA3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25,41■■□□□ 1,66
Retrieved 100 of 76,532 protein–RNA pairs in 12,1 ms