Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.11■■□□□ 1.29
Upk3bQ80YF6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Upk3bQ80YF6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.07■■□□□ 1.28
Upk3bQ80YF6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Upk3bQ80YF6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Upk3bQ80YF6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Upk3bQ80YF6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Upk3bQ80YF6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Upk3bQ80YF6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Upk3bQ80YF6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
Upk3bQ80YF6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.89■■□□□ 1.25
Upk3bQ80YF6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Upk3bQ80YF6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Upk3bQ80YF6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Upk3bQ80YF6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Upk3bQ80YF6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.84■■□□□ 1.25
Upk3bQ80YF6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Upk3bQ80YF6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Upk3bQ80YF6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Upk3bQ80YF6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.79■■□□□ 1.24
Upk3bQ80YF6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Upk3bQ80YF6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Upk3bQ80YF6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.75■■□□□ 1.23
Upk3bQ80YF6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Upk3bQ80YF6 Gm25238-201ENSMUST00000174914 89 ntBASIC22.7■■□□□ 1.22
Upk3bQ80YF6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Upk3bQ80YF6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.66■■□□□ 1.22
Upk3bQ80YF6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Upk3bQ80YF6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Upk3bQ80YF6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Upk3bQ80YF6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Upk3bQ80YF6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Upk3bQ80YF6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Upk3bQ80YF6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Upk3bQ80YF6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Upk3bQ80YF6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.56■■□□□ 1.2
Upk3bQ80YF6 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.55■■□□□ 1.2
Upk3bQ80YF6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
Upk3bQ80YF6 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.47■■□□□ 1.19
Upk3bQ80YF6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Upk3bQ80YF6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.46■■□□□ 1.19
Upk3bQ80YF6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Upk3bQ80YF6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Upk3bQ80YF6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Upk3bQ80YF6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Upk3bQ80YF6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Upk3bQ80YF6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.39■■□□□ 1.17
Upk3bQ80YF6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Upk3bQ80YF6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Upk3bQ80YF6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
Upk3bQ80YF6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
Upk3bQ80YF6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.35■■□□□ 1.17
Upk3bQ80YF6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.34■■□□□ 1.17
Upk3bQ80YF6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Upk3bQ80YF6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Upk3bQ80YF6 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.34■■□□□ 1.17
Upk3bQ80YF6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Upk3bQ80YF6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Upk3bQ80YF6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Upk3bQ80YF6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.29■■□□□ 1.16
Upk3bQ80YF6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Upk3bQ80YF6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Upk3bQ80YF6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Upk3bQ80YF6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.22■■□□□ 1.15
Upk3bQ80YF6 Rab21-202ENSMUST00000218831 843 ntBASIC22.22■■□□□ 1.15
Upk3bQ80YF6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Upk3bQ80YF6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Upk3bQ80YF6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.2■■□□□ 1.14
Upk3bQ80YF6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Upk3bQ80YF6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.19■■□□□ 1.14
Upk3bQ80YF6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Upk3bQ80YF6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.17■■□□□ 1.14
Upk3bQ80YF6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Upk3bQ80YF6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Upk3bQ80YF6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Upk3bQ80YF6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Upk3bQ80YF6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Upk3bQ80YF6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Upk3bQ80YF6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Upk3bQ80YF6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Upk3bQ80YF6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Upk3bQ80YF6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Upk3bQ80YF6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Upk3bQ80YF6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.04■■□□□ 1.12
Upk3bQ80YF6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
Upk3bQ80YF6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Upk3bQ80YF6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.03■■□□□ 1.12
Upk3bQ80YF6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Upk3bQ80YF6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Upk3bQ80YF6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Upk3bQ80YF6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22■■□□□ 1.11
Upk3bQ80YF6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Upk3bQ80YF6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Upk3bQ80YF6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Upk3bQ80YF6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Upk3bQ80YF6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Upk3bQ80YF6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Upk3bQ80YF6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Upk3bQ80YF6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Upk3bQ80YF6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms