Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.07■■■□□ 2.72
Prpf40bQ80W14 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Prpf40bQ80W14 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.02■■■□□ 2.72
Prpf40bQ80W14 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32■■■□□ 2.71
Prpf40bQ80W14 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.96■■■□□ 2.71
Prpf40bQ80W14 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Prpf40bQ80W14 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.95■■■□□ 2.71
Prpf40bQ80W14 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
Prpf40bQ80W14 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
Prpf40bQ80W14 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Prpf40bQ80W14 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.9■■■□□ 2.7
Prpf40bQ80W14 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Prpf40bQ80W14 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.89■■■□□ 2.7
Prpf40bQ80W14 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Prpf40bQ80W14 Zfp131-205ENSMUST00000223812 663 ntBASIC31.85■■■□□ 2.69
Prpf40bQ80W14 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Prpf40bQ80W14 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Prpf40bQ80W14 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Prpf40bQ80W14 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.71■■■□□ 2.67
Prpf40bQ80W14 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Prpf40bQ80W14 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Prpf40bQ80W14 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.66■■■□□ 2.66
Prpf40bQ80W14 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Prpf40bQ80W14 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.63■■■□□ 2.65
Prpf40bQ80W14 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Prpf40bQ80W14 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Prpf40bQ80W14 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Prpf40bQ80W14 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
Prpf40bQ80W14 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Prpf40bQ80W14 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.54■■■□□ 2.64
Prpf40bQ80W14 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Prpf40bQ80W14 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Prpf40bQ80W14 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Prpf40bQ80W14 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Prpf40bQ80W14 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Prpf40bQ80W14 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Prpf40bQ80W14 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.4■■■□□ 2.62
Prpf40bQ80W14 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.4■■■□□ 2.62
Prpf40bQ80W14 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Prpf40bQ80W14 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.38■■■□□ 2.61
Prpf40bQ80W14 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Prpf40bQ80W14 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Prpf40bQ80W14 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.32■■■□□ 2.6
Prpf40bQ80W14 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Prpf40bQ80W14 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
Prpf40bQ80W14 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Prpf40bQ80W14 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Prpf40bQ80W14 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
Prpf40bQ80W14 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Prpf40bQ80W14 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Prpf40bQ80W14 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Prpf40bQ80W14 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Prpf40bQ80W14 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Prpf40bQ80W14 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Prpf40bQ80W14 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Prpf40bQ80W14 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Prpf40bQ80W14 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Prpf40bQ80W14 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Prpf40bQ80W14 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Prpf40bQ80W14 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
Prpf40bQ80W14 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
Prpf40bQ80W14 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.03■■■□□ 2.56
Prpf40bQ80W14 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.01■■■□□ 2.55
Prpf40bQ80W14 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Prpf40bQ80W14 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Prpf40bQ80W14 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Prpf40bQ80W14 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Prpf40bQ80W14 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
Prpf40bQ80W14 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Prpf40bQ80W14 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Prpf40bQ80W14 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Prpf40bQ80W14 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.83■■■□□ 2.53
Prpf40bQ80W14 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.81■■■□□ 2.52
Prpf40bQ80W14 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Prpf40bQ80W14 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Prpf40bQ80W14 Gm16148-201ENSMUST00000119653 893 ntBASIC30.78■■■□□ 2.52
Prpf40bQ80W14 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.76■■■□□ 2.51
Prpf40bQ80W14 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Prpf40bQ80W14 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.7■■■□□ 2.5
Prpf40bQ80W14 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.69■■■□□ 2.5
Prpf40bQ80W14 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Prpf40bQ80W14 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Prpf40bQ80W14 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Prpf40bQ80W14 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
Prpf40bQ80W14 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Prpf40bQ80W14 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
Prpf40bQ80W14 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Prpf40bQ80W14 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Prpf40bQ80W14 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Prpf40bQ80W14 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Prpf40bQ80W14 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Prpf40bQ80W14 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Prpf40bQ80W14 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Prpf40bQ80W14 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Prpf40bQ80W14 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.52■■■□□ 2.48
Prpf40bQ80W14 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.52■■■□□ 2.48
Prpf40bQ80W14 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
Prpf40bQ80W14 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.51■■■□□ 2.48
Prpf40bQ80W14 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
Prpf40bQ80W14 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms