Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.07■■■□□ 2.72
Prpf40bQ80W14 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Prpf40bQ80W14 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.02■■■□□ 2.72
Prpf40bQ80W14 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32■■■□□ 2.71
Prpf40bQ80W14 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.96■■■□□ 2.71
Prpf40bQ80W14 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Prpf40bQ80W14 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.95■■■□□ 2.71
Prpf40bQ80W14 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
Prpf40bQ80W14 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
Prpf40bQ80W14 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Prpf40bQ80W14 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.9■■■□□ 2.7
Prpf40bQ80W14 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Prpf40bQ80W14 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.89■■■□□ 2.7
Prpf40bQ80W14 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Prpf40bQ80W14 Zfp131-205ENSMUST00000223812 663 ntBASIC31.85■■■□□ 2.69
Prpf40bQ80W14 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Prpf40bQ80W14 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Prpf40bQ80W14 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Prpf40bQ80W14 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.71■■■□□ 2.67
Prpf40bQ80W14 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Prpf40bQ80W14 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Prpf40bQ80W14 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.66■■■□□ 2.66
Prpf40bQ80W14 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Prpf40bQ80W14 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.63■■■□□ 2.65
Prpf40bQ80W14 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Prpf40bQ80W14 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Prpf40bQ80W14 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Prpf40bQ80W14 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
Prpf40bQ80W14 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Prpf40bQ80W14 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.54■■■□□ 2.64
Prpf40bQ80W14 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Prpf40bQ80W14 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Prpf40bQ80W14 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Prpf40bQ80W14 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Prpf40bQ80W14 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Prpf40bQ80W14 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Prpf40bQ80W14 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.4■■■□□ 2.62
Prpf40bQ80W14 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.4■■■□□ 2.62
Prpf40bQ80W14 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Prpf40bQ80W14 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.38■■■□□ 2.61
Prpf40bQ80W14 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Prpf40bQ80W14 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Prpf40bQ80W14 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.32■■■□□ 2.6
Prpf40bQ80W14 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Prpf40bQ80W14 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
Prpf40bQ80W14 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Prpf40bQ80W14 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Prpf40bQ80W14 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
Prpf40bQ80W14 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Prpf40bQ80W14 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Prpf40bQ80W14 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Prpf40bQ80W14 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Prpf40bQ80W14 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Prpf40bQ80W14 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Prpf40bQ80W14 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Prpf40bQ80W14 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Prpf40bQ80W14 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Prpf40bQ80W14 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Prpf40bQ80W14 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Prpf40bQ80W14 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
Prpf40bQ80W14 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
Prpf40bQ80W14 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.03■■■□□ 2.56
Prpf40bQ80W14 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.01■■■□□ 2.55
Prpf40bQ80W14 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Prpf40bQ80W14 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Prpf40bQ80W14 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Prpf40bQ80W14 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Prpf40bQ80W14 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
Prpf40bQ80W14 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Prpf40bQ80W14 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Prpf40bQ80W14 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Prpf40bQ80W14 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.83■■■□□ 2.53
Prpf40bQ80W14 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.81■■■□□ 2.52
Prpf40bQ80W14 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Prpf40bQ80W14 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Prpf40bQ80W14 Gm16148-201ENSMUST00000119653 893 ntBASIC30.78■■■□□ 2.52
Prpf40bQ80W14 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.76■■■□□ 2.51
Prpf40bQ80W14 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Prpf40bQ80W14 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.7■■■□□ 2.5
Prpf40bQ80W14 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.69■■■□□ 2.5
Prpf40bQ80W14 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Prpf40bQ80W14 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Prpf40bQ80W14 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Prpf40bQ80W14 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
Prpf40bQ80W14 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Prpf40bQ80W14 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
Prpf40bQ80W14 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Prpf40bQ80W14 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Prpf40bQ80W14 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Prpf40bQ80W14 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Prpf40bQ80W14 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Prpf40bQ80W14 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Prpf40bQ80W14 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Prpf40bQ80W14 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Prpf40bQ80W14 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.52■■■□□ 2.48
Prpf40bQ80W14 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.52■■■□□ 2.48
Prpf40bQ80W14 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
Prpf40bQ80W14 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.51■■■□□ 2.48
Prpf40bQ80W14 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
Prpf40bQ80W14 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms