Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Gm27322-201ENSMUST00000184007 104 ntBASIC30,49■■■□□ 2,47
Sh3tc2Q80VA5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30,45■■■□□ 2,47
Sh3tc2Q80VA5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30,43■■■□□ 2,46
Sh3tc2Q80VA5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30,41■■■□□ 2,46
Sh3tc2Q80VA5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30,4■■■□□ 2,46
Sh3tc2Q80VA5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30,36■■■□□ 2,45
Sh3tc2Q80VA5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30,35■■■□□ 2,45
Sh3tc2Q80VA5 Gm10524-201ENSMUST00000181931 1893 ntBASIC30,34■■■□□ 2,45
Sh3tc2Q80VA5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30,32■■■□□ 2,44
Sh3tc2Q80VA5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30,3■■■□□ 2,44
Sh3tc2Q80VA5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30,3■■■□□ 2,44
Sh3tc2Q80VA5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30,25■■■□□ 2,43
Sh3tc2Q80VA5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30,24■■■□□ 2,43
Sh3tc2Q80VA5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30,23■■■□□ 2,43
Sh3tc2Q80VA5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30,2■■■□□ 2,43
Sh3tc2Q80VA5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30,17■■■□□ 2,42
Sh3tc2Q80VA5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30,14■■■□□ 2,42
Sh3tc2Q80VA5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30,13■■■□□ 2,41
Sh3tc2Q80VA5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30,11■■■□□ 2,41
Sh3tc2Q80VA5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30,07■■■□□ 2,4
Sh3tc2Q80VA5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30,06■■■□□ 2,4
Sh3tc2Q80VA5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30,05■■■□□ 2,4
Sh3tc2Q80VA5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30,04■■■□□ 2,4
Sh3tc2Q80VA5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30,01■■■□□ 2,4
Sh3tc2Q80VA5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29,99■■■□□ 2,39
Sh3tc2Q80VA5 Zfp131-205ENSMUST00000223812 663 ntBASIC29,92■■■□□ 2,38
Sh3tc2Q80VA5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29,9■■■□□ 2,38
Sh3tc2Q80VA5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29,9■■■□□ 2,38
Sh3tc2Q80VA5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29,87■■■□□ 2,37
Sh3tc2Q80VA5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29,84■■■□□ 2,37
Sh3tc2Q80VA5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29,83■■■□□ 2,37
Sh3tc2Q80VA5 Gm42596-201ENSMUST00000196305 1958 ntBASIC29,83■■■□□ 2,37
Sh3tc2Q80VA5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29,8■■■□□ 2,36
Sh3tc2Q80VA5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29,78■■■□□ 2,36
Sh3tc2Q80VA5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29,77■■■□□ 2,36
Sh3tc2Q80VA5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29,77■■■□□ 2,36
Sh3tc2Q80VA5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29,77■■■□□ 2,36
Sh3tc2Q80VA5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29,76■■■□□ 2,35
Sh3tc2Q80VA5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
Sh3tc2Q80VA5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29,72■■■□□ 2,35
Sh3tc2Q80VA5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29,65■■■□□ 2,34
Sh3tc2Q80VA5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29,63■■■□□ 2,33
Sh3tc2Q80VA5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29,61■■■□□ 2,33
Sh3tc2Q80VA5 AC166822.3-201ENSMUST00000227394 661 ntBASIC29,6■■■□□ 2,33
Sh3tc2Q80VA5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29,6■■■□□ 2,33
Sh3tc2Q80VA5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29,6■■■□□ 2,33
Sh3tc2Q80VA5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29,59■■■□□ 2,33
Sh3tc2Q80VA5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29,56■■■□□ 2,32
Sh3tc2Q80VA5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29,56■■■□□ 2,32
Sh3tc2Q80VA5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29,52■■■□□ 2,32
Sh3tc2Q80VA5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29,48■■■□□ 2,31
Sh3tc2Q80VA5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC29,48■■■□□ 2,31
Sh3tc2Q80VA5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29,48■■■□□ 2,31
Sh3tc2Q80VA5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29,47■■■□□ 2,31
Sh3tc2Q80VA5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29,45■■■□□ 2,31
Sh3tc2Q80VA5 AL845457.1-201ENSMUST00000197244 68 ntBASIC29,44■■■□□ 2,3
Sh3tc2Q80VA5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29,43■■■□□ 2,3
Sh3tc2Q80VA5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29,42■■■□□ 2,3
Sh3tc2Q80VA5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29,41■■■□□ 2,3
Sh3tc2Q80VA5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29,4■■■□□ 2,3
Sh3tc2Q80VA5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29,4■■■□□ 2,3
Sh3tc2Q80VA5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29,4■■■□□ 2,3
Sh3tc2Q80VA5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29,4■■■□□ 2,3
Sh3tc2Q80VA5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29,37■■■□□ 2,29
Sh3tc2Q80VA5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29,35■■■□□ 2,29
Sh3tc2Q80VA5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29,34■■■□□ 2,29
Sh3tc2Q80VA5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29,31■■■□□ 2,28
Sh3tc2Q80VA5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29,3■■■□□ 2,28
Sh3tc2Q80VA5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29,2■■■□□ 2,27
Sh3tc2Q80VA5 Gm16148-201ENSMUST00000119653 893 ntBASIC29,2■■■□□ 2,26
Sh3tc2Q80VA5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29,19■■■□□ 2,26
Sh3tc2Q80VA5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29,19■■■□□ 2,26
Sh3tc2Q80VA5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29,17■■■□□ 2,26
Sh3tc2Q80VA5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29,16■■■□□ 2,26
Sh3tc2Q80VA5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29,15■■■□□ 2,26
Sh3tc2Q80VA5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29,11■■■□□ 2,25
Sh3tc2Q80VA5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29,11■■■□□ 2,25
Sh3tc2Q80VA5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29,09■■■□□ 2,25
Sh3tc2Q80VA5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29,09■■■□□ 2,25
Sh3tc2Q80VA5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29,08■■■□□ 2,25
Sh3tc2Q80VA5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29,07■■■□□ 2,24
Sh3tc2Q80VA5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29,05■■■□□ 2,24
Sh3tc2Q80VA5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29,05■■■□□ 2,24
Sh3tc2Q80VA5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29,04■■■□□ 2,24
Sh3tc2Q80VA5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29,04■■■□□ 2,24
Sh3tc2Q80VA5 Tdp2-203ENSMUST00000223804 1136 ntBASIC29,02■■■□□ 2,24
Sh3tc2Q80VA5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29,02■■■□□ 2,24
Sh3tc2Q80VA5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29,01■■■□□ 2,23
Sh3tc2Q80VA5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29,01■■■□□ 2,23
Sh3tc2Q80VA5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2,23
Sh3tc2Q80VA5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28,99■■■□□ 2,23
Sh3tc2Q80VA5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28,99■■■□□ 2,23
Sh3tc2Q80VA5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28,96■■■□□ 2,23
Sh3tc2Q80VA5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28,95■■■□□ 2,22
Sh3tc2Q80VA5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28,94■■■□□ 2,22
Sh3tc2Q80VA5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC28,94■■■□□ 2,22
Sh3tc2Q80VA5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28,92■■■□□ 2,22
Sh3tc2Q80VA5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28,9■■■□□ 2,22
Sh3tc2Q80VA5 Peli2-204ENSMUST00000226513 1320 ntBASIC28,9■■■□□ 2,22
Sh3tc2Q80VA5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28,89■■■□□ 2,22
Retrieved 100 of 76,532 protein–RNA pairs in 17,6 ms