Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps13bQ80TY5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Vps13bQ80TY5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps13bQ80TY5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Vps13bQ80TY5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps13bQ80TY5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps13bQ80TY5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps13bQ80TY5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.46■□□□□ 0.39
Vps13bQ80TY5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Vps13bQ80TY5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps13bQ80TY5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13bQ80TY5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps13bQ80TY5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Vps13bQ80TY5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps13bQ80TY5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps13bQ80TY5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vps13bQ80TY5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps13bQ80TY5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vps13bQ80TY5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps13bQ80TY5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.3■□□□□ 0.36
Vps13bQ80TY5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps13bQ80TY5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps13bQ80TY5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps13bQ80TY5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13bQ80TY5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13bQ80TY5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13bQ80TY5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13bQ80TY5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps13bQ80TY5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Vps13bQ80TY5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.21■□□□□ 0.34
Vps13bQ80TY5 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.21■□□□□ 0.34
Vps13bQ80TY5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps13bQ80TY5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps13bQ80TY5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.13■□□□□ 0.33
Vps13bQ80TY5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps13bQ80TY5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Vps13bQ80TY5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Vps13bQ80TY5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps13bQ80TY5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps13bQ80TY5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps13bQ80TY5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps13bQ80TY5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Vps13bQ80TY5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps13bQ80TY5 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.03■□□□□ 0.32
Vps13bQ80TY5 Gm42596-201ENSMUST00000196305 1958 ntBASIC17.03■□□□□ 0.32
Vps13bQ80TY5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.02■□□□□ 0.32
Vps13bQ80TY5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vps13bQ80TY5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vps13bQ80TY5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Vps13bQ80TY5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Vps13bQ80TY5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.98■□□□□ 0.31
Vps13bQ80TY5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps13bQ80TY5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps13bQ80TY5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps13bQ80TY5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps13bQ80TY5 Gm16148-201ENSMUST00000119653 893 ntBASIC16.94■□□□□ 0.3
Vps13bQ80TY5 Gm10524-201ENSMUST00000181931 1893 ntBASIC16.94■□□□□ 0.3
Vps13bQ80TY5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps13bQ80TY5 Gm45855-201ENSMUST00000212546 880 ntBASIC16.93■□□□□ 0.3
Vps13bQ80TY5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.92■□□□□ 0.3
Vps13bQ80TY5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps13bQ80TY5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.91■□□□□ 0.3
Vps13bQ80TY5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps13bQ80TY5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Vps13bQ80TY5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps13bQ80TY5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Vps13bQ80TY5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps13bQ80TY5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps13bQ80TY5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps13bQ80TY5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps13bQ80TY5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps13bQ80TY5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC16.86■□□□□ 0.29
Vps13bQ80TY5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vps13bQ80TY5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Vps13bQ80TY5 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.86■□□□□ 0.29
Vps13bQ80TY5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps13bQ80TY5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps13bQ80TY5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC16.83■□□□□ 0.28
Vps13bQ80TY5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.82■□□□□ 0.28
Vps13bQ80TY5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps13bQ80TY5 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.82■□□□□ 0.28
Vps13bQ80TY5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps13bQ80TY5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps13bQ80TY5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Vps13bQ80TY5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps13bQ80TY5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.78■□□□□ 0.28
Vps13bQ80TY5 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vps13bQ80TY5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps13bQ80TY5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC16.77■□□□□ 0.28
Vps13bQ80TY5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps13bQ80TY5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps13bQ80TY5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC16.74■□□□□ 0.27
Vps13bQ80TY5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps13bQ80TY5 Peli2-204ENSMUST00000226513 1320 ntBASIC16.73■□□□□ 0.27
Vps13bQ80TY5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps13bQ80TY5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Vps13bQ80TY5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Vps13bQ80TY5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.68■□□□□ 0.26
Vps13bQ80TY5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps13bQ80TY5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms