Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Cspg5Q71M36 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Cspg5Q71M36 Gm27322-201ENSMUST00000184007 104 ntBASIC28.57■■■□□ 2.16
Cspg5Q71M36 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.53■■■□□ 2.16
Cspg5Q71M36 Gm24804-201ENSMUST00000174982 85 ntBASIC28.53■■■□□ 2.16
Cspg5Q71M36 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Cspg5Q71M36 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
Cspg5Q71M36 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Cspg5Q71M36 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Cspg5Q71M36 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.39■■■□□ 2.14
Cspg5Q71M36 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cspg5Q71M36 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Cspg5Q71M36 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.22■■■□□ 2.11
Cspg5Q71M36 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cspg5Q71M36 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Cspg5Q71M36 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Cspg5Q71M36 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cspg5Q71M36 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cspg5Q71M36 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Cspg5Q71M36 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Cspg5Q71M36 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Cspg5Q71M36 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Cspg5Q71M36 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Cspg5Q71M36 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Cspg5Q71M36 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.06■■■□□ 2.08
Cspg5Q71M36 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Cspg5Q71M36 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Cspg5Q71M36 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.04■■■□□ 2.08
Cspg5Q71M36 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.03■■■□□ 2.08
Cspg5Q71M36 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.02■■■□□ 2.08
Cspg5Q71M36 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Cspg5Q71M36 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28■■■□□ 2.07
Cspg5Q71M36 Zfp131-205ENSMUST00000223812 663 ntBASIC27.96■■■□□ 2.07
Cspg5Q71M36 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.95■■■□□ 2.06
Cspg5Q71M36 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Cspg5Q71M36 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.93■■■□□ 2.06
Cspg5Q71M36 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Cspg5Q71M36 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Cspg5Q71M36 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Cspg5Q71M36 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Cspg5Q71M36 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Cspg5Q71M36 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Cspg5Q71M36 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Cspg5Q71M36 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Cspg5Q71M36 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Cspg5Q71M36 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Cspg5Q71M36 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Cspg5Q71M36 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
Cspg5Q71M36 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.7■■■□□ 2.02
Cspg5Q71M36 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Cspg5Q71M36 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.69■■■□□ 2.02
Cspg5Q71M36 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.69■■■□□ 2.02
Cspg5Q71M36 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Cspg5Q71M36 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.65■■■□□ 2.02
Cspg5Q71M36 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Cspg5Q71M36 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.62■■■□□ 2.01
Cspg5Q71M36 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Cspg5Q71M36 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.61■■■□□ 2.01
Cspg5Q71M36 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Cspg5Q71M36 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
Cspg5Q71M36 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Cspg5Q71M36 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Cspg5Q71M36 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
Cspg5Q71M36 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Cspg5Q71M36 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.52■■■□□ 2
Cspg5Q71M36 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Cspg5Q71M36 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Cspg5Q71M36 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Cspg5Q71M36 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Cspg5Q71M36 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Cspg5Q71M36 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
Cspg5Q71M36 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Cspg5Q71M36 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Cspg5Q71M36 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Cspg5Q71M36 Gm16148-201ENSMUST00000119653 893 ntBASIC27.36■■□□□ 1.97
Cspg5Q71M36 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Cspg5Q71M36 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cspg5Q71M36 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Cspg5Q71M36 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cspg5Q71M36 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Cspg5Q71M36 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Cspg5Q71M36 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Cspg5Q71M36 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cspg5Q71M36 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cspg5Q71M36 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
Cspg5Q71M36 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.19■■□□□ 1.94
Cspg5Q71M36 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Cspg5Q71M36 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cspg5Q71M36 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cspg5Q71M36 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Cspg5Q71M36 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Cspg5Q71M36 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cspg5Q71M36 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cspg5Q71M36 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cspg5Q71M36 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cspg5Q71M36 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.1■■□□□ 1.93
Cspg5Q71M36 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Cspg5Q71M36 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Cspg5Q71M36 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.07■■□□□ 1.92
Cspg5Q71M36 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms