Protein–RNA interactions for Protein: Q6PFR5

Tra2a, Transformer-2 protein homolog alpha, mousemouse

Known RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tra2aQ6PFR5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Tra2aQ6PFR5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Tra2aQ6PFR5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Tra2aQ6PFR5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Tra2aQ6PFR5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Tra2aQ6PFR5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
Tra2aQ6PFR5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.06■■■□□ 2.08
Tra2aQ6PFR5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.05■■■□□ 2.08
Tra2aQ6PFR5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Tra2aQ6PFR5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28■■■□□ 2.07
Tra2aQ6PFR5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Tra2aQ6PFR5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Tra2aQ6PFR5 Gm24804-201ENSMUST00000174982 85 ntBASIC27.96■■■□□ 2.07
Tra2aQ6PFR5 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.93■■■□□ 2.06
Tra2aQ6PFR5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Tra2aQ6PFR5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Tra2aQ6PFR5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Tra2aQ6PFR5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.81■■■□□ 2.04
Tra2aQ6PFR5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.77■■■□□ 2.04
Tra2aQ6PFR5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Tra2aQ6PFR5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Tra2aQ6PFR5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Tra2aQ6PFR5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
Tra2aQ6PFR5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Tra2aQ6PFR5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Tra2aQ6PFR5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Tra2aQ6PFR5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
Tra2aQ6PFR5 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.52■■■□□ 2
Tra2aQ6PFR5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Tra2aQ6PFR5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Tra2aQ6PFR5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Tra2aQ6PFR5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.47■■□□□ 1.99
Tra2aQ6PFR5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.46■■□□□ 1.99
Tra2aQ6PFR5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Tra2aQ6PFR5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Tra2aQ6PFR5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Tra2aQ6PFR5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Tra2aQ6PFR5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Tra2aQ6PFR5 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.37■■□□□ 1.97
Tra2aQ6PFR5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.37■■□□□ 1.97
Tra2aQ6PFR5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Tra2aQ6PFR5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Tra2aQ6PFR5 Zfp131-205ENSMUST00000223812 663 ntBASIC27.35■■□□□ 1.97
Tra2aQ6PFR5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Tra2aQ6PFR5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Tra2aQ6PFR5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Tra2aQ6PFR5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.31■■□□□ 1.96
Tra2aQ6PFR5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Tra2aQ6PFR5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
Tra2aQ6PFR5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Tra2aQ6PFR5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Tra2aQ6PFR5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Tra2aQ6PFR5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Tra2aQ6PFR5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Tra2aQ6PFR5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Tra2aQ6PFR5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Tra2aQ6PFR5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Tra2aQ6PFR5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Tra2aQ6PFR5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Tra2aQ6PFR5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Tra2aQ6PFR5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Tra2aQ6PFR5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.01■■□□□ 1.91
Tra2aQ6PFR5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27■■□□□ 1.91
Tra2aQ6PFR5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Tra2aQ6PFR5 Gm16148-201ENSMUST00000119653 893 ntBASIC26.99■■□□□ 1.91
Tra2aQ6PFR5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Tra2aQ6PFR5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Tra2aQ6PFR5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Tra2aQ6PFR5 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.94■■□□□ 1.9
Tra2aQ6PFR5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Tra2aQ6PFR5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Tra2aQ6PFR5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
Tra2aQ6PFR5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Tra2aQ6PFR5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Tra2aQ6PFR5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Tra2aQ6PFR5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Tra2aQ6PFR5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.82■■□□□ 1.88
Tra2aQ6PFR5 Peli2-204ENSMUST00000226513 1320 ntBASIC26.81■■□□□ 1.88
Tra2aQ6PFR5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Tra2aQ6PFR5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Tra2aQ6PFR5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.79■■□□□ 1.88
Tra2aQ6PFR5 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.79■■□□□ 1.88
Tra2aQ6PFR5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Tra2aQ6PFR5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Tra2aQ6PFR5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Tra2aQ6PFR5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Tra2aQ6PFR5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Tra2aQ6PFR5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Tra2aQ6PFR5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Tra2aQ6PFR5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
Tra2aQ6PFR5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Tra2aQ6PFR5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Tra2aQ6PFR5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Tra2aQ6PFR5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Tra2aQ6PFR5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.63■■□□□ 1.85
Tra2aQ6PFR5 Mipep-204ENSMUST00000225043 1548 ntBASIC26.62■■□□□ 1.85
Tra2aQ6PFR5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.62■■□□□ 1.85
Tra2aQ6PFR5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Tra2aQ6PFR5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Tra2aQ6PFR5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.56■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms