Protein–RNA interactions for Protein: Q6P8I6

Cox11, Cytochrome c oxidase assembly protein COX11, mitochondrial, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cox11Q6P8I6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cox11Q6P8I6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Cox11Q6P8I6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cox11Q6P8I6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cox11Q6P8I6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cox11Q6P8I6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cox11Q6P8I6 Rab21-202ENSMUST00000218831 843 ntBASIC19.69■□□□□ 0.74
Cox11Q6P8I6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cox11Q6P8I6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cox11Q6P8I6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cox11Q6P8I6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cox11Q6P8I6 Gm25262-201ENSMUST00000174934 133 ntBASIC19.63■□□□□ 0.73
Cox11Q6P8I6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cox11Q6P8I6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.61■□□□□ 0.73
Cox11Q6P8I6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cox11Q6P8I6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cox11Q6P8I6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cox11Q6P8I6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cox11Q6P8I6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.57■□□□□ 0.72
Cox11Q6P8I6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.57■□□□□ 0.72
Cox11Q6P8I6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.55■□□□□ 0.72
Cox11Q6P8I6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cox11Q6P8I6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cox11Q6P8I6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cox11Q6P8I6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cox11Q6P8I6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cox11Q6P8I6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cox11Q6P8I6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cox11Q6P8I6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cox11Q6P8I6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Cox11Q6P8I6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cox11Q6P8I6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cox11Q6P8I6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cox11Q6P8I6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.34■□□□□ 0.69
Cox11Q6P8I6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cox11Q6P8I6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cox11Q6P8I6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cox11Q6P8I6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cox11Q6P8I6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cox11Q6P8I6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.28■□□□□ 0.68
Cox11Q6P8I6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.26■□□□□ 0.67
Cox11Q6P8I6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cox11Q6P8I6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cox11Q6P8I6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cox11Q6P8I6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cox11Q6P8I6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cox11Q6P8I6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cox11Q6P8I6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.2■□□□□ 0.66
Cox11Q6P8I6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cox11Q6P8I6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.19■□□□□ 0.66
Cox11Q6P8I6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cox11Q6P8I6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cox11Q6P8I6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cox11Q6P8I6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cox11Q6P8I6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cox11Q6P8I6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cox11Q6P8I6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cox11Q6P8I6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cox11Q6P8I6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cox11Q6P8I6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cox11Q6P8I6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cox11Q6P8I6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.11■□□□□ 0.65
Cox11Q6P8I6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cox11Q6P8I6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.11■□□□□ 0.65
Cox11Q6P8I6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cox11Q6P8I6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cox11Q6P8I6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cox11Q6P8I6 Gm26115-201ENSMUST00000175605 87 ntBASIC19.08■□□□□ 0.64
Cox11Q6P8I6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cox11Q6P8I6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cox11Q6P8I6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cox11Q6P8I6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.03■□□□□ 0.64
Cox11Q6P8I6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.02■□□□□ 0.64
Cox11Q6P8I6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cox11Q6P8I6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cox11Q6P8I6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cox11Q6P8I6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cox11Q6P8I6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.97■□□□□ 0.63
Cox11Q6P8I6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cox11Q6P8I6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cox11Q6P8I6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cox11Q6P8I6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cox11Q6P8I6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cox11Q6P8I6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cox11Q6P8I6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cox11Q6P8I6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cox11Q6P8I6 Gm8109-201ENSMUST00000194076 746 ntBASIC18.89■□□□□ 0.61
Cox11Q6P8I6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cox11Q6P8I6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cox11Q6P8I6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cox11Q6P8I6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cox11Q6P8I6 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.84■□□□□ 0.61
Cox11Q6P8I6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cox11Q6P8I6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cox11Q6P8I6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cox11Q6P8I6 Gm27322-201ENSMUST00000184007 104 ntBASIC18.83■□□□□ 0.6
Cox11Q6P8I6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cox11Q6P8I6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cox11Q6P8I6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.81■□□□□ 0.6
Cox11Q6P8I6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms