Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Notch3Q61982 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Notch3Q61982 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Notch3Q61982 Gm27322-201ENSMUST00000184007 104 ntBASIC21.07■□□□□ 0.96
Notch3Q61982 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Notch3Q61982 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.05■□□□□ 0.96
Notch3Q61982 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Notch3Q61982 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Notch3Q61982 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Notch3Q61982 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Notch3Q61982 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Notch3Q61982 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Notch3Q61982 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Notch3Q61982 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.97■□□□□ 0.95
Notch3Q61982 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Notch3Q61982 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Notch3Q61982 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Notch3Q61982 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Notch3Q61982 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Notch3Q61982 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Notch3Q61982 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.84■□□□□ 0.93
Notch3Q61982 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.84■□□□□ 0.93
Notch3Q61982 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.81■□□□□ 0.92
Notch3Q61982 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.79■□□□□ 0.92
Notch3Q61982 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Notch3Q61982 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Notch3Q61982 Zfp131-205ENSMUST00000223812 663 ntBASIC20.76■□□□□ 0.91
Notch3Q61982 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Notch3Q61982 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Notch3Q61982 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Notch3Q61982 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Notch3Q61982 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.71■□□□□ 0.91
Notch3Q61982 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Notch3Q61982 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Notch3Q61982 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Notch3Q61982 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Notch3Q61982 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Notch3Q61982 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Notch3Q61982 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Notch3Q61982 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Notch3Q61982 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Notch3Q61982 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.61■□□□□ 0.89
Notch3Q61982 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Notch3Q61982 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Notch3Q61982 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.58■□□□□ 0.88
Notch3Q61982 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Notch3Q61982 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Notch3Q61982 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Notch3Q61982 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Notch3Q61982 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.54■□□□□ 0.88
Notch3Q61982 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Notch3Q61982 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Notch3Q61982 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Notch3Q61982 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.47■□□□□ 0.87
Notch3Q61982 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.47■□□□□ 0.87
Notch3Q61982 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Notch3Q61982 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Notch3Q61982 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Notch3Q61982 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Notch3Q61982 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Notch3Q61982 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Notch3Q61982 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Notch3Q61982 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Notch3Q61982 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Notch3Q61982 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Notch3Q61982 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Notch3Q61982 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.38■□□□□ 0.85
Notch3Q61982 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Notch3Q61982 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Notch3Q61982 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Notch3Q61982 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Notch3Q61982 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Notch3Q61982 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Notch3Q61982 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.29■□□□□ 0.84
Notch3Q61982 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.28■□□□□ 0.84
Notch3Q61982 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Notch3Q61982 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Notch3Q61982 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.27■□□□□ 0.84
Notch3Q61982 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Notch3Q61982 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Notch3Q61982 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Notch3Q61982 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.2■□□□□ 0.82
Notch3Q61982 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Notch3Q61982 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Notch3Q61982 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Notch3Q61982 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Notch3Q61982 Gm16148-201ENSMUST00000119653 893 ntBASIC20.15■□□□□ 0.82
Notch3Q61982 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Notch3Q61982 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Notch3Q61982 Peli2-204ENSMUST00000226513 1320 ntBASIC20.12■□□□□ 0.81
Notch3Q61982 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Notch3Q61982 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.08■□□□□ 0.8
Notch3Q61982 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.07■□□□□ 0.8
Notch3Q61982 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Notch3Q61982 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Notch3Q61982 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Notch3Q61982 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Notch3Q61982 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.05■□□□□ 0.8
Notch3Q61982 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.04■□□□□ 0.8
Notch3Q61982 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms