Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Rai1Q61818 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
Rai1Q61818 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Rai1Q61818 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.89■■■□□ 2.06
Rai1Q61818 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Rai1Q61818 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
Rai1Q61818 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.87■■■□□ 2.05
Rai1Q61818 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Rai1Q61818 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rai1Q61818 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rai1Q61818 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
Rai1Q61818 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.75■■■□□ 2.03
Rai1Q61818 Gm24804-201ENSMUST00000174982 85 ntBASIC27.72■■■□□ 2.03
Rai1Q61818 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Rai1Q61818 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.69■■■□□ 2.02
Rai1Q61818 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rai1Q61818 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rai1Q61818 Gm27322-201ENSMUST00000184007 104 ntBASIC27.66■■■□□ 2.02
Rai1Q61818 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Rai1Q61818 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Rai1Q61818 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
Rai1Q61818 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Rai1Q61818 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rai1Q61818 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Rai1Q61818 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Rai1Q61818 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.37■■□□□ 1.97
Rai1Q61818 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.37■■□□□ 1.97
Rai1Q61818 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rai1Q61818 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.3■■□□□ 1.96
Rai1Q61818 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.3■■□□□ 1.96
Rai1Q61818 Zfp131-205ENSMUST00000223812 663 ntBASIC27.25■■□□□ 1.95
Rai1Q61818 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rai1Q61818 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rai1Q61818 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
Rai1Q61818 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rai1Q61818 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rai1Q61818 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rai1Q61818 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rai1Q61818 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.19■■□□□ 1.94
Rai1Q61818 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Rai1Q61818 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.17■■□□□ 1.94
Rai1Q61818 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Rai1Q61818 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Rai1Q61818 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rai1Q61818 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Rai1Q61818 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rai1Q61818 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
Rai1Q61818 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rai1Q61818 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rai1Q61818 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Rai1Q61818 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rai1Q61818 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rai1Q61818 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Rai1Q61818 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Rai1Q61818 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
Rai1Q61818 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
Rai1Q61818 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rai1Q61818 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Rai1Q61818 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.93■■□□□ 1.9
Rai1Q61818 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rai1Q61818 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Rai1Q61818 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Rai1Q61818 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rai1Q61818 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rai1Q61818 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Rai1Q61818 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
Rai1Q61818 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Rai1Q61818 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Rai1Q61818 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Rai1Q61818 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rai1Q61818 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.76■■□□□ 1.88
Rai1Q61818 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.74■■□□□ 1.87
Rai1Q61818 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Rai1Q61818 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Rai1Q61818 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Rai1Q61818 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Rai1Q61818 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Rai1Q61818 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.66■■□□□ 1.86
Rai1Q61818 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rai1Q61818 Gm16148-201ENSMUST00000119653 893 ntBASIC26.59■■□□□ 1.85
Rai1Q61818 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Rai1Q61818 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Rai1Q61818 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rai1Q61818 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.54■■□□□ 1.84
Rai1Q61818 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Rai1Q61818 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Rai1Q61818 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Rai1Q61818 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
Rai1Q61818 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Rai1Q61818 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Rai1Q61818 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Rai1Q61818 Peli2-204ENSMUST00000226513 1320 ntBASIC26.46■■□□□ 1.83
Rai1Q61818 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Rai1Q61818 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rai1Q61818 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.45■■□□□ 1.83
Rai1Q61818 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.44■■□□□ 1.82
Rai1Q61818 Mipep-204ENSMUST00000225043 1548 ntBASIC26.4■■□□□ 1.82
Rai1Q61818 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rai1Q61818 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Rai1Q61818 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms