Protein–RNA interactions for Protein: Q61001

Lama5, Laminin subunit alpha-5, mousemouse

Predictions only

Length 3,718 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lama5Q61001 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Lama5Q61001 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.12■■□□□ 1.61
Lama5Q61001 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.1■■□□□ 1.61
Lama5Q61001 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.09■■□□□ 1.61
Lama5Q61001 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Lama5Q61001 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Lama5Q61001 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.01■■□□□ 1.59
Lama5Q61001 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Lama5Q61001 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
Lama5Q61001 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Lama5Q61001 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Lama5Q61001 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Lama5Q61001 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Lama5Q61001 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Lama5Q61001 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.84■■□□□ 1.57
Lama5Q61001 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Lama5Q61001 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Lama5Q61001 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.78■■□□□ 1.56
Lama5Q61001 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Lama5Q61001 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Lama5Q61001 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Lama5Q61001 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Lama5Q61001 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Lama5Q61001 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Lama5Q61001 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Lama5Q61001 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Lama5Q61001 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Lama5Q61001 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Lama5Q61001 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Lama5Q61001 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Lama5Q61001 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Lama5Q61001 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.61■■□□□ 1.53
Lama5Q61001 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Lama5Q61001 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Lama5Q61001 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Lama5Q61001 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.5■■□□□ 1.51
Lama5Q61001 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Lama5Q61001 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.49■■□□□ 1.51
Lama5Q61001 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Lama5Q61001 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.46■■□□□ 1.51
Lama5Q61001 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.46■■□□□ 1.51
Lama5Q61001 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Lama5Q61001 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.43■■□□□ 1.5
Lama5Q61001 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.43■■□□□ 1.5
Lama5Q61001 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Lama5Q61001 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lama5Q61001 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.39■■□□□ 1.5
Lama5Q61001 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Lama5Q61001 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Lama5Q61001 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Lama5Q61001 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.35■■□□□ 1.49
Lama5Q61001 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lama5Q61001 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lama5Q61001 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Lama5Q61001 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lama5Q61001 Gm16148-201ENSMUST00000119653 893 ntBASIC24.31■■□□□ 1.48
Lama5Q61001 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lama5Q61001 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Lama5Q61001 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Lama5Q61001 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Lama5Q61001 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Lama5Q61001 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.26■■□□□ 1.47
Lama5Q61001 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
Lama5Q61001 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Lama5Q61001 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Lama5Q61001 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.24■■□□□ 1.47
Lama5Q61001 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.24■■□□□ 1.47
Lama5Q61001 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Lama5Q61001 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.47
Lama5Q61001 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Lama5Q61001 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Lama5Q61001 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Lama5Q61001 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Lama5Q61001 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Lama5Q61001 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.13■■□□□ 1.45
Lama5Q61001 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Lama5Q61001 Gm45855-201ENSMUST00000212546 880 ntBASIC24.13■■□□□ 1.45
Lama5Q61001 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Lama5Q61001 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Lama5Q61001 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Lama5Q61001 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Lama5Q61001 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Lama5Q61001 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
Lama5Q61001 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.04■■□□□ 1.44
Lama5Q61001 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Lama5Q61001 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Lama5Q61001 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Lama5Q61001 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Lama5Q61001 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Lama5Q61001 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Lama5Q61001 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Lama5Q61001 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.98■■□□□ 1.43
Lama5Q61001 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Lama5Q61001 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Lama5Q61001 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.94■■□□□ 1.42
Lama5Q61001 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.93■■□□□ 1.42
Lama5Q61001 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Lama5Q61001 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Lama5Q61001 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Lama5Q61001 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms