Protein–RNA interactions for Protein: Q60949

Tbc1d1, TBC1 domain family member 1, mousemouse

Predictions only

Length 1,255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbc1d1Q60949 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Tbc1d1Q60949 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Tbc1d1Q60949 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
Tbc1d1Q60949 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.46■■■□□ 2.31
Tbc1d1Q60949 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Tbc1d1Q60949 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Tbc1d1Q60949 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Tbc1d1Q60949 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.44■■■□□ 2.3
Tbc1d1Q60949 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Tbc1d1Q60949 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.43■■■□□ 2.3
Tbc1d1Q60949 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29.42■■■□□ 2.3
Tbc1d1Q60949 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Tbc1d1Q60949 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Tbc1d1Q60949 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.39■■■□□ 2.3
Tbc1d1Q60949 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
Tbc1d1Q60949 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.37■■■□□ 2.29
Tbc1d1Q60949 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Tbc1d1Q60949 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Tbc1d1Q60949 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.35■■■□□ 2.29
Tbc1d1Q60949 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.32■■■□□ 2.28
Tbc1d1Q60949 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.31■■■□□ 2.28
Tbc1d1Q60949 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Tbc1d1Q60949 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Tbc1d1Q60949 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.23■■■□□ 2.27
Tbc1d1Q60949 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.23■■■□□ 2.27
Tbc1d1Q60949 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Tbc1d1Q60949 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Tbc1d1Q60949 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29.19■■■□□ 2.26
Tbc1d1Q60949 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Tbc1d1Q60949 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Tbc1d1Q60949 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Tbc1d1Q60949 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29.08■■■□□ 2.25
Tbc1d1Q60949 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Tbc1d1Q60949 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Tbc1d1Q60949 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Tbc1d1Q60949 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.86■■■□□ 2.21
Tbc1d1Q60949 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Tbc1d1Q60949 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Tbc1d1Q60949 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
Tbc1d1Q60949 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Tbc1d1Q60949 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
Tbc1d1Q60949 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.8■■■□□ 2.2
Tbc1d1Q60949 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Tbc1d1Q60949 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.78■■■□□ 2.2
Tbc1d1Q60949 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
Tbc1d1Q60949 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Tbc1d1Q60949 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Tbc1d1Q60949 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Tbc1d1Q60949 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.75■■■□□ 2.19
Tbc1d1Q60949 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Tbc1d1Q60949 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Tbc1d1Q60949 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Tbc1d1Q60949 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Tbc1d1Q60949 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
Tbc1d1Q60949 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.62■■■□□ 2.17
Tbc1d1Q60949 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Tbc1d1Q60949 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.57■■■□□ 2.16
Tbc1d1Q60949 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.56■■■□□ 2.16
Tbc1d1Q60949 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.16
Tbc1d1Q60949 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Tbc1d1Q60949 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Tbc1d1Q60949 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Tbc1d1Q60949 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Tbc1d1Q60949 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Tbc1d1Q60949 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Tbc1d1Q60949 Tdp2-203ENSMUST00000223804 1136 ntBASIC28.45■■■□□ 2.14
Tbc1d1Q60949 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Tbc1d1Q60949 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Tbc1d1Q60949 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Tbc1d1Q60949 Gm16148-201ENSMUST00000119653 893 ntBASIC28.41■■■□□ 2.14
Tbc1d1Q60949 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Tbc1d1Q60949 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Tbc1d1Q60949 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Tbc1d1Q60949 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Tbc1d1Q60949 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
Tbc1d1Q60949 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.31■■■□□ 2.12
Tbc1d1Q60949 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Tbc1d1Q60949 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
Tbc1d1Q60949 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
Tbc1d1Q60949 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Tbc1d1Q60949 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Tbc1d1Q60949 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
Tbc1d1Q60949 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
Tbc1d1Q60949 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Tbc1d1Q60949 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Tbc1d1Q60949 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Tbc1d1Q60949 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28.19■■■□□ 2.1
Tbc1d1Q60949 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.18■■■□□ 2.1
Tbc1d1Q60949 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.18■■■□□ 2.1
Tbc1d1Q60949 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
Tbc1d1Q60949 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Tbc1d1Q60949 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Tbc1d1Q60949 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Tbc1d1Q60949 Gm45855-201ENSMUST00000212546 880 ntBASIC28.12■■■□□ 2.09
Tbc1d1Q60949 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC28.1■■■□□ 2.09
Tbc1d1Q60949 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tbc1d1Q60949 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tbc1d1Q60949 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tbc1d1Q60949 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Tbc1d1Q60949 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms