Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Herc2Q4U2R1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Herc2Q4U2R1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.93■□□□□ 0.46
Herc2Q4U2R1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Herc2Q4U2R1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.9■□□□□ 0.46
Herc2Q4U2R1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Herc2Q4U2R1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.89■□□□□ 0.45
Herc2Q4U2R1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Herc2Q4U2R1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Herc2Q4U2R1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Herc2Q4U2R1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.85■□□□□ 0.45
Herc2Q4U2R1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Herc2Q4U2R1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Herc2Q4U2R1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Herc2Q4U2R1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Herc2Q4U2R1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Herc2Q4U2R1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.76■□□□□ 0.43
Herc2Q4U2R1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.73■□□□□ 0.43
Herc2Q4U2R1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Herc2Q4U2R1 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.73■□□□□ 0.43
Herc2Q4U2R1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Herc2Q4U2R1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Herc2Q4U2R1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Herc2Q4U2R1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.59■□□□□ 0.41
Herc2Q4U2R1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Herc2Q4U2R1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Herc2Q4U2R1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Herc2Q4U2R1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Herc2Q4U2R1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Herc2Q4U2R1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herc2Q4U2R1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Herc2Q4U2R1 Gm45855-201ENSMUST00000212546 880 ntBASIC17.51■□□□□ 0.39
Herc2Q4U2R1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Herc2Q4U2R1 Gm16148-201ENSMUST00000119653 893 ntBASIC17.5■□□□□ 0.39
Herc2Q4U2R1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.49■□□□□ 0.39
Herc2Q4U2R1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Herc2Q4U2R1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Herc2Q4U2R1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herc2Q4U2R1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.47■□□□□ 0.39
Herc2Q4U2R1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Herc2Q4U2R1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herc2Q4U2R1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Herc2Q4U2R1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC17.45■□□□□ 0.38
Herc2Q4U2R1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Herc2Q4U2R1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Herc2Q4U2R1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Herc2Q4U2R1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC17.43■□□□□ 0.38
Herc2Q4U2R1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Herc2Q4U2R1 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.42■□□□□ 0.38
Herc2Q4U2R1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Herc2Q4U2R1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Herc2Q4U2R1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.4■□□□□ 0.38
Herc2Q4U2R1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Herc2Q4U2R1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Herc2Q4U2R1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Herc2Q4U2R1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Herc2Q4U2R1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Herc2Q4U2R1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Herc2Q4U2R1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.35■□□□□ 0.37
Herc2Q4U2R1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Herc2Q4U2R1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Herc2Q4U2R1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Herc2Q4U2R1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Herc2Q4U2R1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Herc2Q4U2R1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Herc2Q4U2R1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Herc2Q4U2R1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.3■□□□□ 0.36
Herc2Q4U2R1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.27■□□□□ 0.36
Herc2Q4U2R1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Herc2Q4U2R1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Herc2Q4U2R1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Herc2Q4U2R1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Herc2Q4U2R1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.23■□□□□ 0.35
Herc2Q4U2R1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Herc2Q4U2R1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Herc2Q4U2R1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Herc2Q4U2R1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Herc2Q4U2R1 Gm9397-201ENSMUST00000200125 605 ntBASIC17.2■□□□□ 0.34
Herc2Q4U2R1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Herc2Q4U2R1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Herc2Q4U2R1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.18■□□□□ 0.34
Herc2Q4U2R1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Herc2Q4U2R1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Herc2Q4U2R1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17.13■□□□□ 0.33
Herc2Q4U2R1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herc2Q4U2R1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Herc2Q4U2R1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herc2Q4U2R1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Herc2Q4U2R1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Herc2Q4U2R1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Herc2Q4U2R1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herc2Q4U2R1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herc2Q4U2R1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herc2Q4U2R1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.04■□□□□ 0.32
Herc2Q4U2R1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Herc2Q4U2R1 Gm8503-201ENSMUST00000118131 455 ntBASIC17.03■□□□□ 0.32
Herc2Q4U2R1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Herc2Q4U2R1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Herc2Q4U2R1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Herc2Q4U2R1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms