Protein–RNA interactions for Protein: Q3V0K9

Pls1, Plastin-1, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pls1Q3V0K9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Pls1Q3V0K9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Pls1Q3V0K9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.42■■■□□ 2.78
Pls1Q3V0K9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.41■■■□□ 2.78
Pls1Q3V0K9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Pls1Q3V0K9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Pls1Q3V0K9 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.26■■■□□ 2.75
Pls1Q3V0K9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Pls1Q3V0K9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Pls1Q3V0K9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Pls1Q3V0K9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.11■■■□□ 2.73
Pls1Q3V0K9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Pls1Q3V0K9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
Pls1Q3V0K9 Gm27322-201ENSMUST00000184007 104 ntBASIC32.06■■■□□ 2.72
Pls1Q3V0K9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Pls1Q3V0K9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Pls1Q3V0K9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
Pls1Q3V0K9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Pls1Q3V0K9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Pls1Q3V0K9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Pls1Q3V0K9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.86■■■□□ 2.69
Pls1Q3V0K9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Pls1Q3V0K9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Pls1Q3V0K9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Pls1Q3V0K9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Pls1Q3V0K9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
Pls1Q3V0K9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.73■■■□□ 2.67
Pls1Q3V0K9 Gm24804-201ENSMUST00000174982 85 ntBASIC31.7■■■□□ 2.67
Pls1Q3V0K9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.68■■■□□ 2.66
Pls1Q3V0K9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Pls1Q3V0K9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Pls1Q3V0K9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Pls1Q3V0K9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.62■■■□□ 2.65
Pls1Q3V0K9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.61■■■□□ 2.65
Pls1Q3V0K9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Pls1Q3V0K9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Pls1Q3V0K9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
Pls1Q3V0K9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
Pls1Q3V0K9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Pls1Q3V0K9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Pls1Q3V0K9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
Pls1Q3V0K9 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.44■■■□□ 2.62
Pls1Q3V0K9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Pls1Q3V0K9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
Pls1Q3V0K9 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.37■■■□□ 2.61
Pls1Q3V0K9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.35■■■□□ 2.61
Pls1Q3V0K9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Pls1Q3V0K9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pls1Q3V0K9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Pls1Q3V0K9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Pls1Q3V0K9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Pls1Q3V0K9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.25■■■□□ 2.59
Pls1Q3V0K9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pls1Q3V0K9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pls1Q3V0K9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Pls1Q3V0K9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Pls1Q3V0K9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Pls1Q3V0K9 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.17■■■□□ 2.58
Pls1Q3V0K9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pls1Q3V0K9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Pls1Q3V0K9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Pls1Q3V0K9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Pls1Q3V0K9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Pls1Q3V0K9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
Pls1Q3V0K9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.1■■■□□ 2.57
Pls1Q3V0K9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
Pls1Q3V0K9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Pls1Q3V0K9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Pls1Q3V0K9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Pls1Q3V0K9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Pls1Q3V0K9 Zfp131-205ENSMUST00000223812 663 ntBASIC30.92■■■□□ 2.54
Pls1Q3V0K9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.92■■■□□ 2.54
Pls1Q3V0K9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Pls1Q3V0K9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pls1Q3V0K9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Pls1Q3V0K9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
Pls1Q3V0K9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Pls1Q3V0K9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Pls1Q3V0K9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Pls1Q3V0K9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
Pls1Q3V0K9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.72■■■□□ 2.51
Pls1Q3V0K9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
Pls1Q3V0K9 Mipep-204ENSMUST00000225043 1548 ntBASIC30.7■■■□□ 2.51
Pls1Q3V0K9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Pls1Q3V0K9 Gm16148-201ENSMUST00000119653 893 ntBASIC30.69■■■□□ 2.5
Pls1Q3V0K9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Pls1Q3V0K9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Pls1Q3V0K9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Pls1Q3V0K9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Pls1Q3V0K9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Pls1Q3V0K9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
Pls1Q3V0K9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Pls1Q3V0K9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Pls1Q3V0K9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Pls1Q3V0K9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.64■■■□□ 2.5
Pls1Q3V0K9 Peli2-204ENSMUST00000226513 1320 ntBASIC30.64■■■□□ 2.5
Pls1Q3V0K9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
Pls1Q3V0K9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
Pls1Q3V0K9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Pls1Q3V0K9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms