Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Tnrc6aQ3UHK8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Tnrc6aQ3UHK8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.42■■□□□ 1.82
Tnrc6aQ3UHK8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.39■■□□□ 1.81
Tnrc6aQ3UHK8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Tnrc6aQ3UHK8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Tnrc6aQ3UHK8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Tnrc6aQ3UHK8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Tnrc6aQ3UHK8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Tnrc6aQ3UHK8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Tnrc6aQ3UHK8 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.3■■□□□ 1.8
Tnrc6aQ3UHK8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Tnrc6aQ3UHK8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Tnrc6aQ3UHK8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tnrc6aQ3UHK8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Tnrc6aQ3UHK8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
Tnrc6aQ3UHK8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Tnrc6aQ3UHK8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Tnrc6aQ3UHK8 Gm24804-201ENSMUST00000174982 85 ntBASIC26.16■■□□□ 1.78
Tnrc6aQ3UHK8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.15■■□□□ 1.78
Tnrc6aQ3UHK8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tnrc6aQ3UHK8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Tnrc6aQ3UHK8 Gm27322-201ENSMUST00000184007 104 ntBASIC26.11■■□□□ 1.77
Tnrc6aQ3UHK8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.07■■□□□ 1.76
Tnrc6aQ3UHK8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Tnrc6aQ3UHK8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Tnrc6aQ3UHK8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Tnrc6aQ3UHK8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Tnrc6aQ3UHK8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.92■■□□□ 1.74
Tnrc6aQ3UHK8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Tnrc6aQ3UHK8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.83■■□□□ 1.72
Tnrc6aQ3UHK8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Tnrc6aQ3UHK8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.79■■□□□ 1.72
Tnrc6aQ3UHK8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.79■■□□□ 1.72
Tnrc6aQ3UHK8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Tnrc6aQ3UHK8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Tnrc6aQ3UHK8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.74■■□□□ 1.71
Tnrc6aQ3UHK8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Tnrc6aQ3UHK8 Zfp131-205ENSMUST00000223812 663 ntBASIC25.71■■□□□ 1.71
Tnrc6aQ3UHK8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Tnrc6aQ3UHK8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Tnrc6aQ3UHK8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Tnrc6aQ3UHK8 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.68■■□□□ 1.7
Tnrc6aQ3UHK8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Tnrc6aQ3UHK8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Tnrc6aQ3UHK8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Tnrc6aQ3UHK8 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.66■■□□□ 1.7
Tnrc6aQ3UHK8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Tnrc6aQ3UHK8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Tnrc6aQ3UHK8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Tnrc6aQ3UHK8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Tnrc6aQ3UHK8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Tnrc6aQ3UHK8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Tnrc6aQ3UHK8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
Tnrc6aQ3UHK8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.55■■□□□ 1.68
Tnrc6aQ3UHK8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Tnrc6aQ3UHK8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Tnrc6aQ3UHK8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Tnrc6aQ3UHK8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Tnrc6aQ3UHK8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Tnrc6aQ3UHK8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Tnrc6aQ3UHK8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Tnrc6aQ3UHK8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Tnrc6aQ3UHK8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
Tnrc6aQ3UHK8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Tnrc6aQ3UHK8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Tnrc6aQ3UHK8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Tnrc6aQ3UHK8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Tnrc6aQ3UHK8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Tnrc6aQ3UHK8 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.39■■□□□ 1.66
Tnrc6aQ3UHK8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Tnrc6aQ3UHK8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Tnrc6aQ3UHK8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Tnrc6aQ3UHK8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Tnrc6aQ3UHK8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Tnrc6aQ3UHK8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Tnrc6aQ3UHK8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Tnrc6aQ3UHK8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Tnrc6aQ3UHK8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Tnrc6aQ3UHK8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Tnrc6aQ3UHK8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Tnrc6aQ3UHK8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.21■■□□□ 1.63
Tnrc6aQ3UHK8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Tnrc6aQ3UHK8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.16■■□□□ 1.62
Tnrc6aQ3UHK8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tnrc6aQ3UHK8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tnrc6aQ3UHK8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.13■■□□□ 1.61
Tnrc6aQ3UHK8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.1■■□□□ 1.61
Tnrc6aQ3UHK8 Gm16148-201ENSMUST00000119653 893 ntBASIC25.1■■□□□ 1.61
Tnrc6aQ3UHK8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Tnrc6aQ3UHK8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Tnrc6aQ3UHK8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Tnrc6aQ3UHK8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
Tnrc6aQ3UHK8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Tnrc6aQ3UHK8 Peli2-204ENSMUST00000226513 1320 ntBASIC25.05■■□□□ 1.6
Tnrc6aQ3UHK8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Tnrc6aQ3UHK8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Tnrc6aQ3UHK8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Tnrc6aQ3UHK8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Tnrc6aQ3UHK8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms