Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32,98■■■□□ 2,87
Mmp20P57748 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32,97■■■□□ 2,87
Mmp20P57748 Gm27322-201ENSMUST00000184007 104 ntBASIC32,95■■■□□ 2,87
Mmp20P57748 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32,93■■■□□ 2,86
Mmp20P57748 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32,93■■■□□ 2,86
Mmp20P57748 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32,91■■■□□ 2,86
Mmp20P57748 Gm10524-201ENSMUST00000181931 1893 ntBASIC32,89■■■□□ 2,86
Mmp20P57748 Gm24804-201ENSMUST00000174982 85 ntBASIC32,85■■■□□ 2,85
Mmp20P57748 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32,83■■■□□ 2,85
Mmp20P57748 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32,83■■■□□ 2,85
Mmp20P57748 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32,79■■■□□ 2,84
Mmp20P57748 Gm42596-201ENSMUST00000196305 1958 ntBASIC32,78■■■□□ 2,84
Mmp20P57748 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32,73■■■□□ 2,83
Mmp20P57748 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32,73■■■□□ 2,83
Mmp20P57748 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32,65■■■□□ 2,82
Mmp20P57748 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32,65■■■□□ 2,82
Mmp20P57748 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32,61■■■□□ 2,81
Mmp20P57748 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32,6■■■□□ 2,81
Mmp20P57748 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32,59■■■□□ 2,81
Mmp20P57748 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32,55■■■□□ 2,8
Mmp20P57748 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32,45■■■□□ 2,79
Mmp20P57748 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32,39■■■□□ 2,78
Mmp20P57748 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32,37■■■□□ 2,77
Mmp20P57748 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32,31■■■□□ 2,76
Mmp20P57748 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32,29■■■□□ 2,76
Mmp20P57748 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32,27■■■□□ 2,76
Mmp20P57748 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32,27■■■□□ 2,76
Mmp20P57748 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32,27■■■□□ 2,76
Mmp20P57748 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32,26■■■□□ 2,75
Mmp20P57748 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC32,24■■■□□ 2,75
Mmp20P57748 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32,23■■■□□ 2,75
Mmp20P57748 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32,21■■■□□ 2,75
Mmp20P57748 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32,19■■■□□ 2,74
Mmp20P57748 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32,16■■■□□ 2,74
Mmp20P57748 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32,15■■■□□ 2,74
Mmp20P57748 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32,14■■■□□ 2,74
Mmp20P57748 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32,14■■■□□ 2,74
Mmp20P57748 AC166822.3-201ENSMUST00000227394 661 ntBASIC32,14■■■□□ 2,74
Mmp20P57748 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32,14■■■□□ 2,74
Mmp20P57748 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32,13■■■□□ 2,73
Mmp20P57748 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32,12■■■□□ 2,73
Mmp20P57748 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32,11■■■□□ 2,73
Mmp20P57748 Zfp131-205ENSMUST00000223812 663 ntBASIC32,1■■■□□ 2,73
Mmp20P57748 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC32,08■■■□□ 2,73
Mmp20P57748 AL845457.1-201ENSMUST00000197244 68 ntBASIC32,05■■■□□ 2,72
Mmp20P57748 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31,98■■■□□ 2,71
Mmp20P57748 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31,98■■■□□ 2,71
Mmp20P57748 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31,95■■■□□ 2,71
Mmp20P57748 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31,92■■■□□ 2,7
Mmp20P57748 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31,9■■■□□ 2,7
Mmp20P57748 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31,9■■■□□ 2,7
Mmp20P57748 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31,89■■■□□ 2,7
Mmp20P57748 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31,87■■■□□ 2,69
Mmp20P57748 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31,85■■■□□ 2,69
Mmp20P57748 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31,83■■■□□ 2,69
Mmp20P57748 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31,77■■■□□ 2,68
Mmp20P57748 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31,74■■■□□ 2,67
Mmp20P57748 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31,72■■■□□ 2,67
Mmp20P57748 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31,72■■■□□ 2,67
Mmp20P57748 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31,71■■■□□ 2,67
Mmp20P57748 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31,71■■■□□ 2,67
Mmp20P57748 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31,68■■■□□ 2,66
Mmp20P57748 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31,67■■■□□ 2,66
Mmp20P57748 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31,66■■■□□ 2,66
Mmp20P57748 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31,65■■■□□ 2,66
Mmp20P57748 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31,64■■■□□ 2,66
Mmp20P57748 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31,58■■■□□ 2,65
Mmp20P57748 Zfp131-207ENSMUST00000224946 1783 ntBASIC31,57■■■□□ 2,64
Mmp20P57748 Gm16148-201ENSMUST00000119653 893 ntBASIC31,55■■■□□ 2,64
Mmp20P57748 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31,53■■■□□ 2,64
Mmp20P57748 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31,51■■■□□ 2,64
Mmp20P57748 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31,5■■■□□ 2,63
Mmp20P57748 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31,5■■■□□ 2,63
Mmp20P57748 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31,47■■■□□ 2,63
Mmp20P57748 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31,44■■■□□ 2,62
Mmp20P57748 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31,43■■■□□ 2,62
Mmp20P57748 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31,4■■■□□ 2,62
Mmp20P57748 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31,4■■■□□ 2,62
Mmp20P57748 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31,4■■■□□ 2,62
Mmp20P57748 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31,38■■■□□ 2,61
Mmp20P57748 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31,38■■■□□ 2,61
Mmp20P57748 Peli2-204ENSMUST00000226513 1320 ntBASIC31,37■■■□□ 2,61
Mmp20P57748 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31,36■■■□□ 2,61
Mmp20P57748 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31,35■■■□□ 2,61
Mmp20P57748 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31,32■■■□□ 2,6
Mmp20P57748 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31,32■■■□□ 2,6
Mmp20P57748 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31,3■■■□□ 2,6
Mmp20P57748 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31,3■■■□□ 2,6
Mmp20P57748 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31,29■■■□□ 2,6
Mmp20P57748 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31,28■■■□□ 2,6
Mmp20P57748 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31,28■■■□□ 2,6
Mmp20P57748 Tdp2-203ENSMUST00000223804 1136 ntBASIC31,27■■■□□ 2,6
Mmp20P57748 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31,23■■■□□ 2,59
Mmp20P57748 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31,22■■■□□ 2,59
Mmp20P57748 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31,21■■■□□ 2,59
Mmp20P57748 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31,2■■■□□ 2,59
Mmp20P57748 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31,2■■■□□ 2,59
Mmp20P57748 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31,17■■■□□ 2,58
Mmp20P57748 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31,17■■■□□ 2,58
Mmp20P57748 Mipep-204ENSMUST00000225043 1548 ntBASIC31,16■■■□□ 2,58
Retrieved 100 of 76,532 protein–RNA pairs in 11,3 ms