Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Xcl1P47993 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xcl1P47993 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xcl1P47993 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xcl1P47993 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Xcl1P47993 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Xcl1P47993 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Xcl1P47993 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Xcl1P47993 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Xcl1P47993 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Xcl1P47993 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Xcl1P47993 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Xcl1P47993 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Xcl1P47993 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.7■□□□□ 0.42
Xcl1P47993 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Xcl1P47993 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Xcl1P47993 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Xcl1P47993 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Xcl1P47993 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xcl1P47993 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Xcl1P47993 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Xcl1P47993 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Xcl1P47993 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Xcl1P47993 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Xcl1P47993 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Xcl1P47993 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Xcl1P47993 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Xcl1P47993 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Xcl1P47993 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Xcl1P47993 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Xcl1P47993 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Xcl1P47993 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Xcl1P47993 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Xcl1P47993 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Xcl1P47993 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Xcl1P47993 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Xcl1P47993 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17.56■□□□□ 0.4
Xcl1P47993 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Xcl1P47993 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Xcl1P47993 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xcl1P47993 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Xcl1P47993 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xcl1P47993 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xcl1P47993 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Xcl1P47993 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Xcl1P47993 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xcl1P47993 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xcl1P47993 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xcl1P47993 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Xcl1P47993 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Xcl1P47993 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Xcl1P47993 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Xcl1P47993 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Xcl1P47993 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Xcl1P47993 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Xcl1P47993 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Xcl1P47993 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Xcl1P47993 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Xcl1P47993 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Xcl1P47993 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xcl1P47993 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Xcl1P47993 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Xcl1P47993 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Xcl1P47993 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Xcl1P47993 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Xcl1P47993 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.29■□□□□ 0.36
Xcl1P47993 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Xcl1P47993 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.28■□□□□ 0.36
Xcl1P47993 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Xcl1P47993 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Xcl1P47993 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Xcl1P47993 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Xcl1P47993 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Xcl1P47993 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.24■□□□□ 0.35
Xcl1P47993 Gm15042-201ENSMUST00000120212 883 ntBASIC17.24■□□□□ 0.35
Xcl1P47993 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Xcl1P47993 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.23■□□□□ 0.35
Xcl1P47993 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.22■□□□□ 0.35
Xcl1P47993 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Xcl1P47993 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Xcl1P47993 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Xcl1P47993 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xcl1P47993 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Xcl1P47993 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xcl1P47993 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Xcl1P47993 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.16■□□□□ 0.34
Xcl1P47993 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xcl1P47993 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xcl1P47993 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xcl1P47993 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xcl1P47993 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xcl1P47993 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xcl1P47993 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xcl1P47993 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xcl1P47993 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Xcl1P47993 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Xcl1P47993 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Xcl1P47993 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Xcl1P47993 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Xcl1P47993 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms