Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ercc1P07903 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ercc1P07903 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ercc1P07903 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ercc1P07903 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ercc1P07903 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Ercc1P07903 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ercc1P07903 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ercc1P07903 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ercc1P07903 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.43■■□□□ 1.18
Ercc1P07903 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ercc1P07903 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ercc1P07903 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.37■■□□□ 1.17
Ercc1P07903 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.35■■□□□ 1.17
Ercc1P07903 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ercc1P07903 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.33■■□□□ 1.16
Ercc1P07903 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ercc1P07903 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ercc1P07903 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ercc1P07903 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ercc1P07903 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Ercc1P07903 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ercc1P07903 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.27■■□□□ 1.16
Ercc1P07903 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Ercc1P07903 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Ercc1P07903 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ercc1P07903 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.25■■□□□ 1.15
Ercc1P07903 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.25■■□□□ 1.15
Ercc1P07903 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Ercc1P07903 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ercc1P07903 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ercc1P07903 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.22■■□□□ 1.15
Ercc1P07903 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ercc1P07903 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ercc1P07903 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ercc1P07903 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ercc1P07903 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ercc1P07903 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ercc1P07903 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.11■■□□□ 1.13
Ercc1P07903 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ercc1P07903 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.09■■□□□ 1.13
Ercc1P07903 Gm25238-201ENSMUST00000174914 89 ntBASIC22.08■■□□□ 1.13
Ercc1P07903 Gm27325-201ENSMUST00000175467 74 ntBASIC22.08■■□□□ 1.13
Ercc1P07903 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ercc1P07903 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ercc1P07903 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Ercc1P07903 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ercc1P07903 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ercc1P07903 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ercc1P07903 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
Ercc1P07903 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.94■■□□□ 1.1
Ercc1P07903 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ercc1P07903 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.93■■□□□ 1.1
Ercc1P07903 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ercc1P07903 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ercc1P07903 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ercc1P07903 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ercc1P07903 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Ercc1P07903 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ercc1P07903 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ercc1P07903 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
Ercc1P07903 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ercc1P07903 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ercc1P07903 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ercc1P07903 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ercc1P07903 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.83■■□□□ 1.09
Ercc1P07903 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ercc1P07903 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ercc1P07903 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.81■■□□□ 1.08
Ercc1P07903 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ercc1P07903 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ercc1P07903 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ercc1P07903 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ercc1P07903 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ercc1P07903 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ercc1P07903 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ercc1P07903 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ercc1P07903 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ercc1P07903 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ercc1P07903 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Ercc1P07903 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ercc1P07903 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ercc1P07903 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ercc1P07903 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.71■■□□□ 1.07
Ercc1P07903 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ercc1P07903 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.68■■□□□ 1.06
Ercc1P07903 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ercc1P07903 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ercc1P07903 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.66■■□□□ 1.06
Ercc1P07903 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ercc1P07903 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ercc1P07903 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.6■■□□□ 1.05
Ercc1P07903 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ercc1P07903 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.59■■□□□ 1.05
Ercc1P07903 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.59■■□□□ 1.05
Ercc1P07903 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.58■■□□□ 1.05
Ercc1P07903 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ercc1P07903 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Ercc1P07903 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ercc1P07903 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms