Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TcraP01849 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TcraP01849 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TcraP01849 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TcraP01849 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TcraP01849 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TcraP01849 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.6■□□□□ 0.73
TcraP01849 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TcraP01849 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TcraP01849 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TcraP01849 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TcraP01849 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TcraP01849 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TcraP01849 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TcraP01849 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
TcraP01849 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TcraP01849 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TcraP01849 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.39■□□□□ 0.69
TcraP01849 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TcraP01849 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TcraP01849 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TcraP01849 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
TcraP01849 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
TcraP01849 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TcraP01849 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TcraP01849 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TcraP01849 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TcraP01849 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TcraP01849 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TcraP01849 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TcraP01849 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TcraP01849 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TcraP01849 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TcraP01849 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TcraP01849 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TcraP01849 Zxda-201ENSMUST00000117281 2621 ntBASIC19.19■□□□□ 0.66
TcraP01849 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TcraP01849 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.16■□□□□ 0.66
TcraP01849 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TcraP01849 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TcraP01849 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TcraP01849 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TcraP01849 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TcraP01849 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TcraP01849 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TcraP01849 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.08■□□□□ 0.64
TcraP01849 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TcraP01849 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TcraP01849 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TcraP01849 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TcraP01849 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.03■□□□□ 0.64
TcraP01849 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TcraP01849 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.01■□□□□ 0.63
TcraP01849 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19■□□□□ 0.63
TcraP01849 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TcraP01849 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.98■□□□□ 0.63
TcraP01849 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TcraP01849 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.95■□□□□ 0.62
TcraP01849 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TcraP01849 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TcraP01849 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TcraP01849 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.92■□□□□ 0.62
TcraP01849 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
TcraP01849 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TcraP01849 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TcraP01849 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.89■□□□□ 0.61
TcraP01849 Gm27325-201ENSMUST00000175467 74 ntBASIC18.89■□□□□ 0.61
TcraP01849 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TcraP01849 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TcraP01849 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TcraP01849 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TcraP01849 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TcraP01849 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TcraP01849 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TcraP01849 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TcraP01849 Gm25238-201ENSMUST00000174914 89 ntBASIC18.83■□□□□ 0.6
TcraP01849 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TcraP01849 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TcraP01849 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TcraP01849 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TcraP01849 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.8■□□□□ 0.6
TcraP01849 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TcraP01849 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TcraP01849 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TcraP01849 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.78■□□□□ 0.6
TcraP01849 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TcraP01849 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TcraP01849 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TcraP01849 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TcraP01849 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TcraP01849 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.74■□□□□ 0.59
TcraP01849 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.74■□□□□ 0.59
TcraP01849 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TcraP01849 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TcraP01849 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TcraP01849 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TcraP01849 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TcraP01849 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
TcraP01849 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TcraP01849 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms