Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Gm17082-201ENSMUST00000166043 1091 ntBASIC25,4■■□□□ 1,66
NgfP01139 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25,39■■□□□ 1,65
NgfP01139 Gm42596-201ENSMUST00000196305 1958 ntBASIC25,36■■□□□ 1,65
NgfP01139 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25,34■■□□□ 1,65
NgfP01139 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25,32■■□□□ 1,64
NgfP01139 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25,28■■□□□ 1,64
NgfP01139 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25,28■■□□□ 1,64
NgfP01139 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25,27■■□□□ 1,64
NgfP01139 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25,19■■□□□ 1,62
NgfP01139 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25,19■■□□□ 1,62
NgfP01139 Gm27322-201ENSMUST00000184007 104 ntBASIC25,18■■□□□ 1,62
NgfP01139 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
NgfP01139 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25,11■■□□□ 1,61
NgfP01139 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25,11■■□□□ 1,61
NgfP01139 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25,1■■□□□ 1,61
NgfP01139 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25,05■■□□□ 1,6
NgfP01139 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24,99■■□□□ 1,59
NgfP01139 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24,99■■□□□ 1,59
NgfP01139 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24,96■■□□□ 1,59
NgfP01139 Gm24804-201ENSMUST00000174982 85 ntBASIC24,95■■□□□ 1,58
NgfP01139 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24,92■■□□□ 1,58
NgfP01139 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24,89■■□□□ 1,57
NgfP01139 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24,88■■□□□ 1,57
NgfP01139 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24,87■■□□□ 1,57
NgfP01139 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24,87■■□□□ 1,57
NgfP01139 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24,86■■□□□ 1,57
NgfP01139 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24,86■■□□□ 1,57
NgfP01139 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24,8■■□□□ 1,56
NgfP01139 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24,8■■□□□ 1,56
NgfP01139 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24,74■■□□□ 1,55
NgfP01139 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24,72■■□□□ 1,55
NgfP01139 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24,71■■□□□ 1,55
NgfP01139 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24,7■■□□□ 1,54
NgfP01139 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24,69■■□□□ 1,54
NgfP01139 AC166822.3-201ENSMUST00000227394 661 ntBASIC24,66■■□□□ 1,54
NgfP01139 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24,65■■□□□ 1,54
NgfP01139 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24,64■■□□□ 1,54
NgfP01139 AL845457.1-201ENSMUST00000197244 68 ntBASIC24,64■■□□□ 1,54
NgfP01139 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24,63■■□□□ 1,53
NgfP01139 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24,6■■□□□ 1,53
NgfP01139 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24,59■■□□□ 1,53
NgfP01139 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24,55■■□□□ 1,52
NgfP01139 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24,55■■□□□ 1,52
NgfP01139 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24,54■■□□□ 1,52
NgfP01139 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24,54■■□□□ 1,52
NgfP01139 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24,51■■□□□ 1,51
NgfP01139 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24,5■■□□□ 1,51
NgfP01139 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24,5■■□□□ 1,51
NgfP01139 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24,49■■□□□ 1,51
NgfP01139 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24,48■■□□□ 1,51
NgfP01139 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24,48■■□□□ 1,51
NgfP01139 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24,47■■□□□ 1,51
NgfP01139 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24,46■■□□□ 1,51
NgfP01139 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24,45■■□□□ 1,5
NgfP01139 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24,44■■□□□ 1,5
NgfP01139 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24,41■■□□□ 1,5
NgfP01139 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24,4■■□□□ 1,5
NgfP01139 Zfp131-207ENSMUST00000224946 1783 ntBASIC24,39■■□□□ 1,49
NgfP01139 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24,38■■□□□ 1,49
NgfP01139 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24,38■■□□□ 1,49
NgfP01139 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24,37■■□□□ 1,49
NgfP01139 Zfp131-205ENSMUST00000223812 663 ntBASIC24,36■■□□□ 1,49
NgfP01139 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24,33■■□□□ 1,49
NgfP01139 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24,32■■□□□ 1,48
NgfP01139 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24,29■■□□□ 1,48
NgfP01139 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24,25■■□□□ 1,47
NgfP01139 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24,23■■□□□ 1,47
NgfP01139 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24,21■■□□□ 1,47
NgfP01139 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24,21■■□□□ 1,47
NgfP01139 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24,2■■□□□ 1,46
NgfP01139 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24,19■■□□□ 1,46
NgfP01139 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24,15■■□□□ 1,46
NgfP01139 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24,15■■□□□ 1,46
NgfP01139 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24,13■■□□□ 1,45
NgfP01139 Gm16148-201ENSMUST00000119653 893 ntBASIC24,11■■□□□ 1,45
NgfP01139 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24,11■■□□□ 1,45
NgfP01139 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24,1■■□□□ 1,45
NgfP01139 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24,1■■□□□ 1,45
NgfP01139 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24,1■■□□□ 1,45
NgfP01139 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24,1■■□□□ 1,45
NgfP01139 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24,08■■□□□ 1,45
NgfP01139 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24,07■■□□□ 1,44
NgfP01139 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24,07■■□□□ 1,44
NgfP01139 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24,07■■□□□ 1,44
NgfP01139 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24,07■■□□□ 1,44
NgfP01139 Peli2-204ENSMUST00000226513 1320 ntBASIC24,07■■□□□ 1,44
NgfP01139 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24,06■■□□□ 1,44
NgfP01139 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24,05■■□□□ 1,44
NgfP01139 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24,04■■□□□ 1,44
NgfP01139 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24,04■■□□□ 1,44
NgfP01139 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24,03■■□□□ 1,44
NgfP01139 Mipep-204ENSMUST00000225043 1548 ntBASIC24,02■■□□□ 1,44
NgfP01139 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23,99■■□□□ 1,43
NgfP01139 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23,99■■□□□ 1,43
NgfP01139 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23,97■■□□□ 1,43
NgfP01139 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23,96■■□□□ 1,43
NgfP01139 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23,95■■□□□ 1,42
NgfP01139 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23,89■■□□□ 1,42
NgfP01139 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23,89■■□□□ 1,41
NgfP01139 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23,87■■□□□ 1,41
Retrieved 100 of 76,532 protein–RNA pairs in 10,3 ms