Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC34,85■■■■□ 3,17
Trim34bJ3QNR8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC34,83■■■■□ 3,17
Trim34bJ3QNR8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC34,82■■■■□ 3,16
Trim34bJ3QNR8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34,72■■■■□ 3,15
Trim34bJ3QNR8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC34,72■■■■□ 3,15
Trim34bJ3QNR8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC34,68■■■■□ 3,14
Trim34bJ3QNR8 Gm17082-201ENSMUST00000166043 1091 ntBASIC34,64■■■■□ 3,14
Trim34bJ3QNR8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC34,63■■■■□ 3,13
Trim34bJ3QNR8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34,54■■■■□ 3,12
Trim34bJ3QNR8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC34,5■■■■□ 3,11
Trim34bJ3QNR8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34,49■■■■□ 3,11
Trim34bJ3QNR8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC34,48■■■■□ 3,11
Trim34bJ3QNR8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC34,47■■■■□ 3,11
Trim34bJ3QNR8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC34,45■■■■□ 3,11
Trim34bJ3QNR8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34,45■■■■□ 3,11
Trim34bJ3QNR8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC34,44■■■■□ 3,1
Trim34bJ3QNR8 Gm27322-201ENSMUST00000184007 104 ntBASIC34,41■■■■□ 3,1
Trim34bJ3QNR8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC34,33■■■■□ 3,09
Trim34bJ3QNR8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC34,32■■■■□ 3,08
Trim34bJ3QNR8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC34,3■■■■□ 3,08
Trim34bJ3QNR8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC34,27■■■■□ 3,08
Trim34bJ3QNR8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC34,24■■■■□ 3,07
Trim34bJ3QNR8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC34,24■■■■□ 3,07
Trim34bJ3QNR8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC34,21■■■■□ 3,07
Trim34bJ3QNR8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC34,13■■■■□ 3,05
Trim34bJ3QNR8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC34,08■■■■□ 3,05
Trim34bJ3QNR8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34,07■■■■□ 3,05
Trim34bJ3QNR8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC34,04■■■■□ 3,04
Trim34bJ3QNR8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34,04■■■■□ 3,04
Trim34bJ3QNR8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC34,03■■■■□ 3,04
Trim34bJ3QNR8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC34,01■■■■□ 3,04
Trim34bJ3QNR8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC34,01■■■■□ 3,03
Trim34bJ3QNR8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3,03
Trim34bJ3QNR8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC33,97■■■■□ 3,03
Trim34bJ3QNR8 Gm24804-201ENSMUST00000174982 85 ntBASIC33,95■■■■□ 3,03
Trim34bJ3QNR8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC33,9■■■■□ 3,02
Trim34bJ3QNR8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC33,89■■■■□ 3,02
Trim34bJ3QNR8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC33,85■■■■□ 3,01
Trim34bJ3QNR8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC33,84■■■■□ 3,01
Trim34bJ3QNR8 AL845457.1-201ENSMUST00000197244 68 ntBASIC33,82■■■■□ 3
Trim34bJ3QNR8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC33,79■■■■□ 3
Trim34bJ3QNR8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC33,76■■■■□ 3
Trim34bJ3QNR8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC33,76■■■□□ 2,99
Trim34bJ3QNR8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC33,76■■■□□ 2,99
Trim34bJ3QNR8 AC166822.3-201ENSMUST00000227394 661 ntBASIC33,75■■■□□ 2,99
Trim34bJ3QNR8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC33,74■■■□□ 2,99
Trim34bJ3QNR8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC33,71■■■□□ 2,99
Trim34bJ3QNR8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC33,66■■■□□ 2,98
Trim34bJ3QNR8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33,59■■■□□ 2,97
Trim34bJ3QNR8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC33,59■■■□□ 2,97
Trim34bJ3QNR8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC33,59■■■□□ 2,97
Trim34bJ3QNR8 Zfp131-207ENSMUST00000224946 1783 ntBASIC33,59■■■□□ 2,97
Trim34bJ3QNR8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC33,58■■■□□ 2,97
Trim34bJ3QNR8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC33,54■■■□□ 2,96
Trim34bJ3QNR8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33,53■■■□□ 2,96
Trim34bJ3QNR8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC33,5■■■□□ 2,95
Trim34bJ3QNR8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC33,46■■■□□ 2,95
Trim34bJ3QNR8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC33,46■■■□□ 2,95
Trim34bJ3QNR8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC33,42■■■□□ 2,94
Trim34bJ3QNR8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC33,4■■■□□ 2,94
Trim34bJ3QNR8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33,4■■■□□ 2,94
Trim34bJ3QNR8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC33,38■■■□□ 2,93
Trim34bJ3QNR8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC33,35■■■□□ 2,93
Trim34bJ3QNR8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC33,34■■■□□ 2,93
Trim34bJ3QNR8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC33,34■■■□□ 2,93
Trim34bJ3QNR8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC33,33■■■□□ 2,93
Trim34bJ3QNR8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC33,31■■■□□ 2,92
Trim34bJ3QNR8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33,31■■■□□ 2,92
Trim34bJ3QNR8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC33,28■■■□□ 2,92
Trim34bJ3QNR8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC33,25■■■□□ 2,91
Trim34bJ3QNR8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33,23■■■□□ 2,91
Trim34bJ3QNR8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC33,21■■■□□ 2,91
Trim34bJ3QNR8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC33,14■■■□□ 2,9
Trim34bJ3QNR8 Zfp131-205ENSMUST00000223812 663 ntBASIC33,11■■■□□ 2,89
Trim34bJ3QNR8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC33,11■■■□□ 2,89
Trim34bJ3QNR8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC33,09■■■□□ 2,89
Trim34bJ3QNR8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC33,09■■■□□ 2,89
Trim34bJ3QNR8 Mipep-204ENSMUST00000225043 1548 ntBASIC33,05■■■□□ 2,88
Trim34bJ3QNR8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC33,05■■■□□ 2,88
Trim34bJ3QNR8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC33,03■■■□□ 2,88
Trim34bJ3QNR8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC33,01■■■□□ 2,87
Trim34bJ3QNR8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC33,01■■■□□ 2,87
Trim34bJ3QNR8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32,99■■■□□ 2,87
Trim34bJ3QNR8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32,98■■■□□ 2,87
Trim34bJ3QNR8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC32,96■■■□□ 2,87
Trim34bJ3QNR8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32,96■■■□□ 2,87
Trim34bJ3QNR8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC32,95■■■□□ 2,87
Trim34bJ3QNR8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32,94■■■□□ 2,86
Trim34bJ3QNR8 Gm16148-201ENSMUST00000119653 893 ntBASIC32,94■■■□□ 2,86
Trim34bJ3QNR8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32,93■■■□□ 2,86
Trim34bJ3QNR8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32,93■■■□□ 2,86
Trim34bJ3QNR8 Peli2-204ENSMUST00000226513 1320 ntBASIC32,93■■■□□ 2,86
Trim34bJ3QNR8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32,93■■■□□ 2,86
Trim34bJ3QNR8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32,91■■■□□ 2,86
Trim34bJ3QNR8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC32,91■■■□□ 2,86
Trim34bJ3QNR8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC32,88■■■□□ 2,85
Trim34bJ3QNR8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC32,87■■■□□ 2,85
Trim34bJ3QNR8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32,86■■■□□ 2,85
Trim34bJ3QNR8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32,86■■■□□ 2,85
Trim34bJ3QNR8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32,82■■■□□ 2,84
Retrieved 100 of 76,532 protein–RNA pairs in 31,8 ms