Protein–RNA interactions for Protein: E9Q5I3

Muc5b, Mucin 5, subtype B, tracheobronchial, mousemouse

Predictions only

Length 4,800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Muc5bE9Q5I3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Muc5bE9Q5I3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Muc5bE9Q5I3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Muc5bE9Q5I3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Muc5bE9Q5I3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Muc5bE9Q5I3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Muc5bE9Q5I3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Muc5bE9Q5I3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Muc5bE9Q5I3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Muc5bE9Q5I3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Muc5bE9Q5I3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC12.94□□□□□ -0.34
Muc5bE9Q5I3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC12.93□□□□□ -0.34
Muc5bE9Q5I3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Muc5bE9Q5I3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Muc5bE9Q5I3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Muc5bE9Q5I3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC12.89□□□□□ -0.35
Muc5bE9Q5I3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC12.86□□□□□ -0.35
Muc5bE9Q5I3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Muc5bE9Q5I3 Tdp2-203ENSMUST00000223804 1136 ntBASIC12.86□□□□□ -0.35
Muc5bE9Q5I3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Muc5bE9Q5I3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Muc5bE9Q5I3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Muc5bE9Q5I3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Muc5bE9Q5I3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Muc5bE9Q5I3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Muc5bE9Q5I3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC12.81□□□□□ -0.36
Muc5bE9Q5I3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC12.8□□□□□ -0.36
Muc5bE9Q5I3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Muc5bE9Q5I3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Muc5bE9Q5I3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC12.79□□□□□ -0.36
Muc5bE9Q5I3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC12.79□□□□□ -0.36
Muc5bE9Q5I3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC12.75□□□□□ -0.37
Muc5bE9Q5I3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC12.74□□□□□ -0.37
Muc5bE9Q5I3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC12.74□□□□□ -0.37
Muc5bE9Q5I3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Muc5bE9Q5I3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC12.72□□□□□ -0.37
Muc5bE9Q5I3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Muc5bE9Q5I3 Gm45855-201ENSMUST00000212546 880 ntBASIC12.71□□□□□ -0.37
Muc5bE9Q5I3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Muc5bE9Q5I3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Muc5bE9Q5I3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Muc5bE9Q5I3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Muc5bE9Q5I3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Muc5bE9Q5I3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Muc5bE9Q5I3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Muc5bE9Q5I3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Muc5bE9Q5I3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Muc5bE9Q5I3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC12.64□□□□□ -0.39
Muc5bE9Q5I3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Muc5bE9Q5I3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Muc5bE9Q5I3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Muc5bE9Q5I3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Muc5bE9Q5I3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Muc5bE9Q5I3 Gm16148-201ENSMUST00000119653 893 ntBASIC12.59□□□□□ -0.39
Muc5bE9Q5I3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Muc5bE9Q5I3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Muc5bE9Q5I3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Muc5bE9Q5I3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Muc5bE9Q5I3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Muc5bE9Q5I3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Muc5bE9Q5I3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Muc5bE9Q5I3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC12.55□□□□□ -0.4
Muc5bE9Q5I3 AC166822.3-201ENSMUST00000227394 661 ntBASIC12.55□□□□□ -0.4
Muc5bE9Q5I3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Muc5bE9Q5I3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Muc5bE9Q5I3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Muc5bE9Q5I3 Gm15039-201ENSMUST00000118914 875 ntBASIC12.53□□□□□ -0.4
Muc5bE9Q5I3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Muc5bE9Q5I3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC12.51□□□□□ -0.41
Muc5bE9Q5I3 Psd-208ENSMUST00000224556 2034 ntBASIC12.51□□□□□ -0.41
Muc5bE9Q5I3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Muc5bE9Q5I3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Muc5bE9Q5I3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Muc5bE9Q5I3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC12.48□□□□□ -0.41
Muc5bE9Q5I3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Muc5bE9Q5I3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Muc5bE9Q5I3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Muc5bE9Q5I3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Muc5bE9Q5I3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Muc5bE9Q5I3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Muc5bE9Q5I3 Gm9397-201ENSMUST00000200125 605 ntBASIC12.44□□□□□ -0.42
Muc5bE9Q5I3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC12.44□□□□□ -0.42
Muc5bE9Q5I3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC12.43□□□□□ -0.42
Muc5bE9Q5I3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC12.41□□□□□ -0.42
Muc5bE9Q5I3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Muc5bE9Q5I3 Gm8503-201ENSMUST00000118131 455 ntBASIC12.4□□□□□ -0.42
Muc5bE9Q5I3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Muc5bE9Q5I3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Muc5bE9Q5I3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Muc5bE9Q5I3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Muc5bE9Q5I3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Muc5bE9Q5I3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Muc5bE9Q5I3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Muc5bE9Q5I3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Muc5bE9Q5I3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Muc5bE9Q5I3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Muc5bE9Q5I3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Muc5bE9Q5I3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC12.34□□□□□ -0.43
Muc5bE9Q5I3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC12.33□□□□□ -0.44
Muc5bE9Q5I3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms