Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29,53■■■□□ 2,32
Sh2d4bA6X942 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29,53■■■□□ 2,32
Sh2d4bA6X942 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29,51■■■□□ 2,32
Sh2d4bA6X942 Gm27322-201ENSMUST00000184007 104 ntBASIC29,5■■■□□ 2,31
Sh2d4bA6X942 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29,46■■■□□ 2,31
Sh2d4bA6X942 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29,42■■■□□ 2,3
Sh2d4bA6X942 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29,37■■■□□ 2,29
Sh2d4bA6X942 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29,36■■■□□ 2,29
Sh2d4bA6X942 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29,34■■■□□ 2,29
Sh2d4bA6X942 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29,32■■■□□ 2,28
Sh2d4bA6X942 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29,29■■■□□ 2,28
Sh2d4bA6X942 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29,28■■■□□ 2,28
Sh2d4bA6X942 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29,27■■■□□ 2,28
Sh2d4bA6X942 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29,27■■■□□ 2,28
Sh2d4bA6X942 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29,25■■■□□ 2,27
Sh2d4bA6X942 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29,23■■■□□ 2,27
Sh2d4bA6X942 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29,19■■■□□ 2,26
Sh2d4bA6X942 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29,17■■■□□ 2,26
Sh2d4bA6X942 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29,16■■■□□ 2,26
Sh2d4bA6X942 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29,11■■■□□ 2,25
Sh2d4bA6X942 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29,1■■■□□ 2,25
Sh2d4bA6X942 Zfp131-205ENSMUST00000223812 663 ntBASIC29,09■■■□□ 2,25
Sh2d4bA6X942 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29,07■■■□□ 2,24
Sh2d4bA6X942 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29,01■■■□□ 2,23
Sh2d4bA6X942 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28,97■■■□□ 2,23
Sh2d4bA6X942 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28,97■■■□□ 2,23
Sh2d4bA6X942 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28,96■■■□□ 2,23
Sh2d4bA6X942 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28,94■■■□□ 2,22
Sh2d4bA6X942 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28,93■■■□□ 2,22
Sh2d4bA6X942 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28,92■■■□□ 2,22
Sh2d4bA6X942 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28,91■■■□□ 2,22
Sh2d4bA6X942 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28,89■■■□□ 2,22
Sh2d4bA6X942 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28,89■■■□□ 2,22
Sh2d4bA6X942 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28,86■■■□□ 2,21
Sh2d4bA6X942 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28,85■■■□□ 2,21
Sh2d4bA6X942 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28,83■■■□□ 2,21
Sh2d4bA6X942 Gm42596-201ENSMUST00000196305 1958 ntBASIC28,81■■■□□ 2,2
Sh2d4bA6X942 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28,81■■■□□ 2,2
Sh2d4bA6X942 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28,77■■■□□ 2,2
Sh2d4bA6X942 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28,77■■■□□ 2,2
Sh2d4bA6X942 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28,75■■■□□ 2,19
Sh2d4bA6X942 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28,74■■■□□ 2,19
Sh2d4bA6X942 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28,72■■■□□ 2,19
Sh2d4bA6X942 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28,71■■■□□ 2,19
Sh2d4bA6X942 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28,7■■■□□ 2,18
Sh2d4bA6X942 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28,69■■■□□ 2,18
Sh2d4bA6X942 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28,67■■■□□ 2,18
Sh2d4bA6X942 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28,66■■■□□ 2,18
Sh2d4bA6X942 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28,62■■■□□ 2,17
Sh2d4bA6X942 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28,61■■■□□ 2,17
Sh2d4bA6X942 AC166822.3-201ENSMUST00000227394 661 ntBASIC28,61■■■□□ 2,17
Sh2d4bA6X942 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28,6■■■□□ 2,17
Sh2d4bA6X942 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28,6■■■□□ 2,17
Sh2d4bA6X942 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28,59■■■□□ 2,17
Sh2d4bA6X942 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28,58■■■□□ 2,17
Sh2d4bA6X942 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28,58■■■□□ 2,17
Sh2d4bA6X942 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28,55■■■□□ 2,16
Sh2d4bA6X942 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28,52■■■□□ 2,16
Sh2d4bA6X942 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28,5■■■□□ 2,15
Sh2d4bA6X942 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28,49■■■□□ 2,15
Sh2d4bA6X942 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28,46■■■□□ 2,15
Sh2d4bA6X942 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28,45■■■□□ 2,15
Sh2d4bA6X942 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28,45■■■□□ 2,15
Sh2d4bA6X942 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28,41■■■□□ 2,14
Sh2d4bA6X942 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28,41■■■□□ 2,14
Sh2d4bA6X942 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28,4■■■□□ 2,14
Sh2d4bA6X942 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28,4■■■□□ 2,14
Sh2d4bA6X942 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28,4■■■□□ 2,14
Sh2d4bA6X942 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28,39■■■□□ 2,14
Sh2d4bA6X942 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28,39■■■□□ 2,14
Sh2d4bA6X942 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28,38■■■□□ 2,13
Sh2d4bA6X942 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28,36■■■□□ 2,13
Sh2d4bA6X942 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28,35■■■□□ 2,13
Sh2d4bA6X942 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28,32■■■□□ 2,12
Sh2d4bA6X942 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28,31■■■□□ 2,12
Sh2d4bA6X942 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28,31■■■□□ 2,12
Sh2d4bA6X942 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28,31■■■□□ 2,12
Sh2d4bA6X942 Gm16148-201ENSMUST00000119653 893 ntBASIC28,3■■■□□ 2,12
Sh2d4bA6X942 AL845457.1-201ENSMUST00000197244 68 ntBASIC28,3■■■□□ 2,12
Sh2d4bA6X942 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28,28■■■□□ 2,12
Sh2d4bA6X942 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28,27■■■□□ 2,12
Sh2d4bA6X942 Tdp2-203ENSMUST00000223804 1136 ntBASIC28,24■■■□□ 2,11
Sh2d4bA6X942 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28,23■■■□□ 2,11
Sh2d4bA6X942 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28,23■■■□□ 2,11
Sh2d4bA6X942 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28,21■■■□□ 2,11
Sh2d4bA6X942 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28,16■■■□□ 2,1
Sh2d4bA6X942 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28,16■■■□□ 2,1
Sh2d4bA6X942 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC28,15■■■□□ 2,1
Sh2d4bA6X942 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28,15■■■□□ 2,1
Sh2d4bA6X942 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28,15■■■□□ 2,1
Sh2d4bA6X942 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28,14■■■□□ 2,1
Sh2d4bA6X942 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28,14■■■□□ 2,09
Sh2d4bA6X942 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28,1■■■□□ 2,09
Sh2d4bA6X942 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28,08■■■□□ 2,09
Sh2d4bA6X942 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28,06■■■□□ 2,08
Sh2d4bA6X942 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28,06■■■□□ 2,08
Sh2d4bA6X942 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28,04■■■□□ 2,08
Sh2d4bA6X942 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28,01■■■□□ 2,07
Sh2d4bA6X942 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28,01■■■□□ 2,07
Sh2d4bA6X942 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28■■■□□ 2,07
Retrieved 100 of 76,532 protein–RNA pairs in 19,7 ms