Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trav12-1A0N8R1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trav12-1A0N8R1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Trav12-1A0N8R1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trav12-1A0N8R1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trav12-1A0N8R1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.92■■□□□ 1.26
Trav12-1A0N8R1 Gm25238-201ENSMUST00000174914 89 ntBASIC22.89■■□□□ 1.25
Trav12-1A0N8R1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Trav12-1A0N8R1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trav12-1A0N8R1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.85■■□□□ 1.25
Trav12-1A0N8R1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.85■■□□□ 1.25
Trav12-1A0N8R1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Trav12-1A0N8R1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.82■■□□□ 1.24
Trav12-1A0N8R1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trav12-1A0N8R1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.8■■□□□ 1.24
Trav12-1A0N8R1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Trav12-1A0N8R1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Trav12-1A0N8R1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trav12-1A0N8R1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.23
Trav12-1A0N8R1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Trav12-1A0N8R1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trav12-1A0N8R1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trav12-1A0N8R1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Trav12-1A0N8R1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trav12-1A0N8R1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Trav12-1A0N8R1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.6■■□□□ 1.21
Trav12-1A0N8R1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trav12-1A0N8R1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trav12-1A0N8R1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trav12-1A0N8R1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trav12-1A0N8R1 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.54■■□□□ 1.2
Trav12-1A0N8R1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
Trav12-1A0N8R1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trav12-1A0N8R1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trav12-1A0N8R1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.5■■□□□ 1.19
Trav12-1A0N8R1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trav12-1A0N8R1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trav12-1A0N8R1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trav12-1A0N8R1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trav12-1A0N8R1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trav12-1A0N8R1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.39■■□□□ 1.17
Trav12-1A0N8R1 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.38■■□□□ 1.17
Trav12-1A0N8R1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trav12-1A0N8R1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.36■■□□□ 1.17
Trav12-1A0N8R1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trav12-1A0N8R1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trav12-1A0N8R1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trav12-1A0N8R1 Rab21-202ENSMUST00000218831 843 ntBASIC22.33■■□□□ 1.17
Trav12-1A0N8R1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trav12-1A0N8R1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trav12-1A0N8R1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.3■■□□□ 1.16
Trav12-1A0N8R1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trav12-1A0N8R1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trav12-1A0N8R1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trav12-1A0N8R1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.25■■□□□ 1.15
Trav12-1A0N8R1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trav12-1A0N8R1 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.22■■□□□ 1.15
Trav12-1A0N8R1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.21■■□□□ 1.15
Trav12-1A0N8R1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trav12-1A0N8R1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.2■■□□□ 1.14
Trav12-1A0N8R1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trav12-1A0N8R1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trav12-1A0N8R1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.15■■□□□ 1.14
Trav12-1A0N8R1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Trav12-1A0N8R1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trav12-1A0N8R1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Trav12-1A0N8R1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trav12-1A0N8R1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.13■■□□□ 1.13
Trav12-1A0N8R1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trav12-1A0N8R1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Trav12-1A0N8R1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trav12-1A0N8R1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.1■■□□□ 1.13
Trav12-1A0N8R1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trav12-1A0N8R1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trav12-1A0N8R1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trav12-1A0N8R1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Trav12-1A0N8R1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trav12-1A0N8R1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trav12-1A0N8R1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trav12-1A0N8R1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trav12-1A0N8R1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Trav12-1A0N8R1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Trav12-1A0N8R1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Trav12-1A0N8R1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Trav12-1A0N8R1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trav12-1A0N8R1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trav12-1A0N8R1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trav12-1A0N8R1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.96■■□□□ 1.11
Trav12-1A0N8R1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trav12-1A0N8R1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trav12-1A0N8R1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trav12-1A0N8R1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.92■■□□□ 1.1
Trav12-1A0N8R1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trav12-1A0N8R1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trav12-1A0N8R1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trav12-1A0N8R1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trav12-1A0N8R1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Trav12-1A0N8R1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trav12-1A0N8R1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
Trav12-1A0N8R1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms