Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Smim17A0A504 Zxda-201ENSMUST00000117281 2621 ntBASIC24.65■■□□□ 1.54
Smim17A0A504 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Smim17A0A504 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Smim17A0A504 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Smim17A0A504 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Smim17A0A504 Gm24109-201ENSMUST00000175489 103 ntBASIC24.57■■□□□ 1.52
Smim17A0A504 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Smim17A0A504 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Smim17A0A504 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Smim17A0A504 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Smim17A0A504 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Smim17A0A504 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Smim17A0A504 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smim17A0A504 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Smim17A0A504 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.34■■□□□ 1.49
Smim17A0A504 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Smim17A0A504 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smim17A0A504 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smim17A0A504 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smim17A0A504 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smim17A0A504 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.28■■□□□ 1.48
Smim17A0A504 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Smim17A0A504 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Smim17A0A504 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Smim17A0A504 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Smim17A0A504 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.18■■□□□ 1.46
Smim17A0A504 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Smim17A0A504 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smim17A0A504 Gm23366-201ENSMUST00000175022 89 ntBASIC24.18■■□□□ 1.46
Smim17A0A504 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smim17A0A504 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smim17A0A504 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smim17A0A504 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Smim17A0A504 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Smim17A0A504 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Smim17A0A504 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Smim17A0A504 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Smim17A0A504 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Smim17A0A504 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Smim17A0A504 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Smim17A0A504 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Smim17A0A504 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smim17A0A504 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.03■■□□□ 1.44
Smim17A0A504 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Smim17A0A504 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Smim17A0A504 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Smim17A0A504 Gm6658-202ENSMUST00000209493 1885 ntBASIC24■■□□□ 1.43
Smim17A0A504 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Smim17A0A504 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.98■■□□□ 1.43
Smim17A0A504 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.98■■□□□ 1.43
Smim17A0A504 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Smim17A0A504 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Smim17A0A504 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.94■■□□□ 1.42
Smim17A0A504 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Smim17A0A504 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smim17A0A504 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smim17A0A504 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Smim17A0A504 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Smim17A0A504 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Smim17A0A504 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.9■■□□□ 1.42
Smim17A0A504 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Smim17A0A504 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smim17A0A504 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smim17A0A504 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smim17A0A504 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smim17A0A504 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smim17A0A504 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.85■■□□□ 1.41
Smim17A0A504 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Smim17A0A504 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smim17A0A504 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smim17A0A504 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smim17A0A504 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smim17A0A504 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smim17A0A504 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Smim17A0A504 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smim17A0A504 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smim17A0A504 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smim17A0A504 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smim17A0A504 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smim17A0A504 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smim17A0A504 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smim17A0A504 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Smim17A0A504 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smim17A0A504 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.72■■□□□ 1.39
Smim17A0A504 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smim17A0A504 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Smim17A0A504 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Smim17A0A504 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.68■■□□□ 1.38
Smim17A0A504 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smim17A0A504 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Smim17A0A504 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Smim17A0A504 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Smim17A0A504 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Smim17A0A504 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Smim17A0A504 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Smim17A0A504 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Smim17A0A504 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Smim17A0A504 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Smim17A0A504 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms