Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gm3880A0A1B0GSB3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm3880A0A1B0GSB3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm3880A0A1B0GSB3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm3880A0A1B0GSB3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm3880A0A1B0GSB3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm3880A0A1B0GSB3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm3880A0A1B0GSB3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm3880A0A1B0GSB3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm3880A0A1B0GSB3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Gm3880A0A1B0GSB3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm3880A0A1B0GSB3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Gm3880A0A1B0GSB3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Gm3880A0A1B0GSB3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC13.59□□□□□ -0.23
Gm3880A0A1B0GSB3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Gm3880A0A1B0GSB3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm3880A0A1B0GSB3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm3880A0A1B0GSB3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm3880A0A1B0GSB3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3880A0A1B0GSB3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3880A0A1B0GSB3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm3880A0A1B0GSB3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Gm3880A0A1B0GSB3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm3880A0A1B0GSB3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gm3880A0A1B0GSB3 Gm10524-201ENSMUST00000181931 1893 ntBASIC13.52□□□□□ -0.25
Gm3880A0A1B0GSB3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Gm3880A0A1B0GSB3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gm3880A0A1B0GSB3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC13.47□□□□□ -0.25
Gm3880A0A1B0GSB3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm3880A0A1B0GSB3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC13.46□□□□□ -0.26
Gm3880A0A1B0GSB3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Gm3880A0A1B0GSB3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC13.46□□□□□ -0.26
Gm3880A0A1B0GSB3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm3880A0A1B0GSB3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Gm3880A0A1B0GSB3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3880A0A1B0GSB3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3880A0A1B0GSB3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3880A0A1B0GSB3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3880A0A1B0GSB3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC13.42□□□□□ -0.26
Gm3880A0A1B0GSB3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm3880A0A1B0GSB3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Gm3880A0A1B0GSB3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm3880A0A1B0GSB3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Gm3880A0A1B0GSB3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm3880A0A1B0GSB3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Gm3880A0A1B0GSB3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3880A0A1B0GSB3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC13.39□□□□□ -0.27
Gm3880A0A1B0GSB3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm3880A0A1B0GSB3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3880A0A1B0GSB3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm3880A0A1B0GSB3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3880A0A1B0GSB3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm3880A0A1B0GSB3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3880A0A1B0GSB3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gm3880A0A1B0GSB3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm3880A0A1B0GSB3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm3880A0A1B0GSB3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm3880A0A1B0GSB3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC13.34□□□□□ -0.27
Gm3880A0A1B0GSB3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm3880A0A1B0GSB3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Gm3880A0A1B0GSB3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3880A0A1B0GSB3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3880A0A1B0GSB3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Gm3880A0A1B0GSB3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3880A0A1B0GSB3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3880A0A1B0GSB3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3880A0A1B0GSB3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3880A0A1B0GSB3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3880A0A1B0GSB3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3880A0A1B0GSB3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Gm3880A0A1B0GSB3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3880A0A1B0GSB3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3880A0A1B0GSB3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm3880A0A1B0GSB3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm3880A0A1B0GSB3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Gm3880A0A1B0GSB3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC13.22□□□□□ -0.29
Gm3880A0A1B0GSB3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3880A0A1B0GSB3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm3880A0A1B0GSB3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm3880A0A1B0GSB3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Gm3880A0A1B0GSB3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3880A0A1B0GSB3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3880A0A1B0GSB3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3880A0A1B0GSB3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3880A0A1B0GSB3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm3880A0A1B0GSB3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Gm3880A0A1B0GSB3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Gm3880A0A1B0GSB3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm3880A0A1B0GSB3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
Gm3880A0A1B0GSB3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm3880A0A1B0GSB3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm3880A0A1B0GSB3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm3880A0A1B0GSB3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3880A0A1B0GSB3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm3880A0A1B0GSB3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm3880A0A1B0GSB3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Gm3880A0A1B0GSB3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm3880A0A1B0GSB3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm3880A0A1B0GSB3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Gm3880A0A1B0GSB3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms