Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13n-2A0A0G2JF93 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13n-2A0A0G2JF93 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13n-2A0A0G2JF93 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav13n-2A0A0G2JF93 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trav13n-2A0A0G2JF93 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trav13n-2A0A0G2JF93 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trav13n-2A0A0G2JF93 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav13n-2A0A0G2JF93 Gm23366-201ENSMUST00000175022 89 ntBASIC17.76■□□□□ 0.43
Trav13n-2A0A0G2JF93 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav13n-2A0A0G2JF93 AC153911.1-202ENSMUST00000218534 1034 ntBASIC17.74■□□□□ 0.43
Trav13n-2A0A0G2JF93 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav13n-2A0A0G2JF93 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav13n-2A0A0G2JF93 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav13n-2A0A0G2JF93 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav13n-2A0A0G2JF93 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav13n-2A0A0G2JF93 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav13n-2A0A0G2JF93 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13n-2A0A0G2JF93 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13n-2A0A0G2JF93 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
Trav13n-2A0A0G2JF93 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav13n-2A0A0G2JF93 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav13n-2A0A0G2JF93 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13n-2A0A0G2JF93 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.6■□□□□ 0.41
Trav13n-2A0A0G2JF93 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trav13n-2A0A0G2JF93 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav13n-2A0A0G2JF93 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav13n-2A0A0G2JF93 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav13n-2A0A0G2JF93 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav13n-2A0A0G2JF93 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Trav13n-2A0A0G2JF93 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav13n-2A0A0G2JF93 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13n-2A0A0G2JF93 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13n-2A0A0G2JF93 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav13n-2A0A0G2JF93 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Trav13n-2A0A0G2JF93 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13n-2A0A0G2JF93 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.42■□□□□ 0.38
Trav13n-2A0A0G2JF93 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav13n-2A0A0G2JF93 Zxda-201ENSMUST00000117281 2621 ntBASIC17.41■□□□□ 0.38
Trav13n-2A0A0G2JF93 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC17.4■□□□□ 0.38
Trav13n-2A0A0G2JF93 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13n-2A0A0G2JF93 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trav13n-2A0A0G2JF93 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav13n-2A0A0G2JF93 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.33■□□□□ 0.37
Trav13n-2A0A0G2JF93 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13n-2A0A0G2JF93 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13n-2A0A0G2JF93 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13n-2A0A0G2JF93 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav13n-2A0A0G2JF93 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav13n-2A0A0G2JF93 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav13n-2A0A0G2JF93 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC17.31■□□□□ 0.36
Trav13n-2A0A0G2JF93 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.31■□□□□ 0.36
Trav13n-2A0A0G2JF93 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13n-2A0A0G2JF93 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13n-2A0A0G2JF93 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13n-2A0A0G2JF93 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13n-2A0A0G2JF93 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13n-2A0A0G2JF93 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13n-2A0A0G2JF93 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13n-2A0A0G2JF93 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13n-2A0A0G2JF93 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13n-2A0A0G2JF93 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13n-2A0A0G2JF93 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13n-2A0A0G2JF93 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.2■□□□□ 0.34
Trav13n-2A0A0G2JF93 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13n-2A0A0G2JF93 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13n-2A0A0G2JF93 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13n-2A0A0G2JF93 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13n-2A0A0G2JF93 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13n-2A0A0G2JF93 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13n-2A0A0G2JF93 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav13n-2A0A0G2JF93 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13n-2A0A0G2JF93 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav13n-2A0A0G2JF93 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13n-2A0A0G2JF93 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13n-2A0A0G2JF93 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13n-2A0A0G2JF93 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13n-2A0A0G2JF93 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13n-2A0A0G2JF93 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13n-2A0A0G2JF93 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav13n-2A0A0G2JF93 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav13n-2A0A0G2JF93 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13n-2A0A0G2JF93 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.07■□□□□ 0.32
Trav13n-2A0A0G2JF93 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13n-2A0A0G2JF93 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13n-2A0A0G2JF93 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13n-2A0A0G2JF93 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13n-2A0A0G2JF93 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13n-2A0A0G2JF93 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13n-2A0A0G2JF93 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13n-2A0A0G2JF93 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13n-2A0A0G2JF93 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.01■□□□□ 0.31
Trav13n-2A0A0G2JF93 Gm9905-201ENSMUST00000065740 1845 ntBASIC17■□□□□ 0.31
Trav13n-2A0A0G2JF93 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13n-2A0A0G2JF93 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13n-2A0A0G2JF93 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13n-2A0A0G2JF93 Zfp131-207ENSMUST00000224946 1783 ntBASIC16.97■□□□□ 0.31
Trav13n-2A0A0G2JF93 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13n-2A0A0G2JF93 Gm27325-201ENSMUST00000175467 74 ntBASIC16.97■□□□□ 0.31
Trav13n-2A0A0G2JF93 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms