Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.15■■□□□ 1.78
Ighv1-43A0A0A6YXN5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Ighv1-43A0A0A6YXN5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ighv1-43A0A0A6YXN5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Ighv1-43A0A0A6YXN5 Gm8109-201ENSMUST00000194076 746 ntBASIC26.09■■□□□ 1.77
Ighv1-43A0A0A6YXN5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Ighv1-43A0A0A6YXN5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ighv1-43A0A0A6YXN5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ighv1-43A0A0A6YXN5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ighv1-43A0A0A6YXN5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ighv1-43A0A0A6YXN5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ighv1-43A0A0A6YXN5 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.89■■□□□ 1.74
Ighv1-43A0A0A6YXN5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ighv1-43A0A0A6YXN5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ighv1-43A0A0A6YXN5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ighv1-43A0A0A6YXN5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ighv1-43A0A0A6YXN5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Ighv1-43A0A0A6YXN5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.86■■□□□ 1.73
Ighv1-43A0A0A6YXN5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ighv1-43A0A0A6YXN5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.83■■□□□ 1.73
Ighv1-43A0A0A6YXN5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.81■■□□□ 1.72
Ighv1-43A0A0A6YXN5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ighv1-43A0A0A6YXN5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ighv1-43A0A0A6YXN5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
Ighv1-43A0A0A6YXN5 Gm27322-201ENSMUST00000184007 104 ntBASIC25.74■■□□□ 1.71
Ighv1-43A0A0A6YXN5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ighv1-43A0A0A6YXN5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Ighv1-43A0A0A6YXN5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
Ighv1-43A0A0A6YXN5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ighv1-43A0A0A6YXN5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Ighv1-43A0A0A6YXN5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Ighv1-43A0A0A6YXN5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.52■■□□□ 1.68
Ighv1-43A0A0A6YXN5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ighv1-43A0A0A6YXN5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ighv1-43A0A0A6YXN5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ighv1-43A0A0A6YXN5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ighv1-43A0A0A6YXN5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ighv1-43A0A0A6YXN5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ighv1-43A0A0A6YXN5 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.39■■□□□ 1.66
Ighv1-43A0A0A6YXN5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ighv1-43A0A0A6YXN5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Ighv1-43A0A0A6YXN5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ighv1-43A0A0A6YXN5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ighv1-43A0A0A6YXN5 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.33■■□□□ 1.65
Ighv1-43A0A0A6YXN5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ighv1-43A0A0A6YXN5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Ighv1-43A0A0A6YXN5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Ighv1-43A0A0A6YXN5 Gm24804-201ENSMUST00000174982 85 ntBASIC25.3■■□□□ 1.64
Ighv1-43A0A0A6YXN5 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.29■■□□□ 1.64
Ighv1-43A0A0A6YXN5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.28■■□□□ 1.64
Ighv1-43A0A0A6YXN5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.28■■□□□ 1.64
Ighv1-43A0A0A6YXN5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ighv1-43A0A0A6YXN5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ighv1-43A0A0A6YXN5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ighv1-43A0A0A6YXN5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.24■■□□□ 1.63
Ighv1-43A0A0A6YXN5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ighv1-43A0A0A6YXN5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ighv1-43A0A0A6YXN5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.2■■□□□ 1.63
Ighv1-43A0A0A6YXN5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.19■■□□□ 1.62
Ighv1-43A0A0A6YXN5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Ighv1-43A0A0A6YXN5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Ighv1-43A0A0A6YXN5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Ighv1-43A0A0A6YXN5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ighv1-43A0A0A6YXN5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Ighv1-43A0A0A6YXN5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ighv1-43A0A0A6YXN5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ighv1-43A0A0A6YXN5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ighv1-43A0A0A6YXN5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Ighv1-43A0A0A6YXN5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ighv1-43A0A0A6YXN5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Ighv1-43A0A0A6YXN5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ighv1-43A0A0A6YXN5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ighv1-43A0A0A6YXN5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ighv1-43A0A0A6YXN5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ighv1-43A0A0A6YXN5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Ighv1-43A0A0A6YXN5 Mipep-204ENSMUST00000225043 1548 ntBASIC24.87■■□□□ 1.57
Ighv1-43A0A0A6YXN5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ighv1-43A0A0A6YXN5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.86■■□□□ 1.57
Ighv1-43A0A0A6YXN5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ighv1-43A0A0A6YXN5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ighv1-43A0A0A6YXN5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ighv1-43A0A0A6YXN5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Ighv1-43A0A0A6YXN5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ighv1-43A0A0A6YXN5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ighv1-43A0A0A6YXN5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ighv1-43A0A0A6YXN5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ighv1-43A0A0A6YXN5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ighv1-43A0A0A6YXN5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ighv1-43A0A0A6YXN5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ighv1-43A0A0A6YXN5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Ighv1-43A0A0A6YXN5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Ighv1-43A0A0A6YXN5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ighv1-43A0A0A6YXN5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.7■■□□□ 1.54
Ighv1-43A0A0A6YXN5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ighv1-43A0A0A6YXN5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ighv1-43A0A0A6YXN5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ighv1-43A0A0A6YXN5 Peli2-204ENSMUST00000226513 1320 ntBASIC24.68■■□□□ 1.54
Ighv1-43A0A0A6YXN5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ighv1-43A0A0A6YXN5 Zfp131-205ENSMUST00000223812 663 ntBASIC24.64■■□□□ 1.54
Ighv1-43A0A0A6YXN5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms