Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav12d-3A0A075B6A4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trav12d-3A0A075B6A4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav12d-3A0A075B6A4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav12d-3A0A075B6A4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav12d-3A0A075B6A4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav12d-3A0A075B6A4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Trav12d-3A0A075B6A4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav12d-3A0A075B6A4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav12d-3A0A075B6A4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Trav12d-3A0A075B6A4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav12d-3A0A075B6A4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav12d-3A0A075B6A4 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.34■□□□□ 0.85
Trav12d-3A0A075B6A4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trav12d-3A0A075B6A4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav12d-3A0A075B6A4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav12d-3A0A075B6A4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav12d-3A0A075B6A4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.31■□□□□ 0.84
Trav12d-3A0A075B6A4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav12d-3A0A075B6A4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav12d-3A0A075B6A4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trav12d-3A0A075B6A4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav12d-3A0A075B6A4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav12d-3A0A075B6A4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav12d-3A0A075B6A4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav12d-3A0A075B6A4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav12d-3A0A075B6A4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav12d-3A0A075B6A4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav12d-3A0A075B6A4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trav12d-3A0A075B6A4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav12d-3A0A075B6A4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Trav12d-3A0A075B6A4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trav12d-3A0A075B6A4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav12d-3A0A075B6A4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav12d-3A0A075B6A4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav12d-3A0A075B6A4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav12d-3A0A075B6A4 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.14■□□□□ 0.81
Trav12d-3A0A075B6A4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav12d-3A0A075B6A4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav12d-3A0A075B6A4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Trav12d-3A0A075B6A4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav12d-3A0A075B6A4 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.09■□□□□ 0.81
Trav12d-3A0A075B6A4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav12d-3A0A075B6A4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.08■□□□□ 0.8
Trav12d-3A0A075B6A4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav12d-3A0A075B6A4 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.05■□□□□ 0.8
Trav12d-3A0A075B6A4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trav12d-3A0A075B6A4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav12d-3A0A075B6A4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trav12d-3A0A075B6A4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav12d-3A0A075B6A4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav12d-3A0A075B6A4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav12d-3A0A075B6A4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav12d-3A0A075B6A4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav12d-3A0A075B6A4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav12d-3A0A075B6A4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.96■□□□□ 0.79
Trav12d-3A0A075B6A4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav12d-3A0A075B6A4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav12d-3A0A075B6A4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav12d-3A0A075B6A4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trav12d-3A0A075B6A4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav12d-3A0A075B6A4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav12d-3A0A075B6A4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav12d-3A0A075B6A4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav12d-3A0A075B6A4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav12d-3A0A075B6A4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
Trav12d-3A0A075B6A4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.87■□□□□ 0.77
Trav12d-3A0A075B6A4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav12d-3A0A075B6A4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav12d-3A0A075B6A4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav12d-3A0A075B6A4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav12d-3A0A075B6A4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trav12d-3A0A075B6A4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav12d-3A0A075B6A4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav12d-3A0A075B6A4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
Trav12d-3A0A075B6A4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Trav12d-3A0A075B6A4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav12d-3A0A075B6A4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav12d-3A0A075B6A4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trav12d-3A0A075B6A4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trav12d-3A0A075B6A4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav12d-3A0A075B6A4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav12d-3A0A075B6A4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav12d-3A0A075B6A4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav12d-3A0A075B6A4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav12d-3A0A075B6A4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Trav12d-3A0A075B6A4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav12d-3A0A075B6A4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav12d-3A0A075B6A4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav12d-3A0A075B6A4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav12d-3A0A075B6A4 Gm24109-201ENSMUST00000175489 103 ntBASIC19.68■□□□□ 0.74
Trav12d-3A0A075B6A4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.68■□□□□ 0.74
Trav12d-3A0A075B6A4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav12d-3A0A075B6A4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav12d-3A0A075B6A4 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.67■□□□□ 0.74
Trav12d-3A0A075B6A4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trav12d-3A0A075B6A4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav12d-3A0A075B6A4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trav12d-3A0A075B6A4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav12d-3A0A075B6A4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms