Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.37■■□□□ 1.01
Trav4-4-dv10A0A075B651 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav4-4-dv10A0A075B651 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav4-4-dv10A0A075B651 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trav4-4-dv10A0A075B651 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.3■■□□□ 1
Trav4-4-dv10A0A075B651 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Trav4-4-dv10A0A075B651 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Trav4-4-dv10A0A075B651 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav4-4-dv10A0A075B651 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trav4-4-dv10A0A075B651 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav4-4-dv10A0A075B651 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav4-4-dv10A0A075B651 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.2■□□□□ 0.98
Trav4-4-dv10A0A075B651 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trav4-4-dv10A0A075B651 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav4-4-dv10A0A075B651 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav4-4-dv10A0A075B651 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trav4-4-dv10A0A075B651 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav4-4-dv10A0A075B651 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trav4-4-dv10A0A075B651 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trav4-4-dv10A0A075B651 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.1■□□□□ 0.97
Trav4-4-dv10A0A075B651 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.09■□□□□ 0.97
Trav4-4-dv10A0A075B651 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav4-4-dv10A0A075B651 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav4-4-dv10A0A075B651 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.02■□□□□ 0.96
Trav4-4-dv10A0A075B651 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Trav4-4-dv10A0A075B651 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav4-4-dv10A0A075B651 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav4-4-dv10A0A075B651 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav4-4-dv10A0A075B651 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav4-4-dv10A0A075B651 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav4-4-dv10A0A075B651 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav4-4-dv10A0A075B651 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav4-4-dv10A0A075B651 Gm25238-201ENSMUST00000174914 89 ntBASIC20.94■□□□□ 0.94
Trav4-4-dv10A0A075B651 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.91■□□□□ 0.94
Trav4-4-dv10A0A075B651 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.91■□□□□ 0.94
Trav4-4-dv10A0A075B651 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav4-4-dv10A0A075B651 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.88■□□□□ 0.93
Trav4-4-dv10A0A075B651 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.88■□□□□ 0.93
Trav4-4-dv10A0A075B651 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.87■□□□□ 0.93
Trav4-4-dv10A0A075B651 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trav4-4-dv10A0A075B651 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav4-4-dv10A0A075B651 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav4-4-dv10A0A075B651 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav4-4-dv10A0A075B651 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trav4-4-dv10A0A075B651 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav4-4-dv10A0A075B651 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trav4-4-dv10A0A075B651 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav4-4-dv10A0A075B651 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.77■□□□□ 0.92
Trav4-4-dv10A0A075B651 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.75■□□□□ 0.91
Trav4-4-dv10A0A075B651 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Trav4-4-dv10A0A075B651 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trav4-4-dv10A0A075B651 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav4-4-dv10A0A075B651 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trav4-4-dv10A0A075B651 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.7■□□□□ 0.9
Trav4-4-dv10A0A075B651 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.7■□□□□ 0.9
Trav4-4-dv10A0A075B651 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.68■□□□□ 0.9
Trav4-4-dv10A0A075B651 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Trav4-4-dv10A0A075B651 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav4-4-dv10A0A075B651 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trav4-4-dv10A0A075B651 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav4-4-dv10A0A075B651 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trav4-4-dv10A0A075B651 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav4-4-dv10A0A075B651 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav4-4-dv10A0A075B651 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav4-4-dv10A0A075B651 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.56■□□□□ 0.88
Trav4-4-dv10A0A075B651 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.54■□□□□ 0.88
Trav4-4-dv10A0A075B651 Rab21-202ENSMUST00000218831 843 ntBASIC20.54■□□□□ 0.88
Trav4-4-dv10A0A075B651 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav4-4-dv10A0A075B651 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav4-4-dv10A0A075B651 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav4-4-dv10A0A075B651 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trav4-4-dv10A0A075B651 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.52■□□□□ 0.88
Trav4-4-dv10A0A075B651 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.52■□□□□ 0.88
Trav4-4-dv10A0A075B651 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trav4-4-dv10A0A075B651 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav4-4-dv10A0A075B651 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Trav4-4-dv10A0A075B651 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trav4-4-dv10A0A075B651 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav4-4-dv10A0A075B651 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.49■□□□□ 0.87
Trav4-4-dv10A0A075B651 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav4-4-dv10A0A075B651 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav4-4-dv10A0A075B651 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav4-4-dv10A0A075B651 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav4-4-dv10A0A075B651 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav4-4-dv10A0A075B651 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trav4-4-dv10A0A075B651 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav4-4-dv10A0A075B651 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav4-4-dv10A0A075B651 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav4-4-dv10A0A075B651 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav4-4-dv10A0A075B651 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trav4-4-dv10A0A075B651 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav4-4-dv10A0A075B651 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav4-4-dv10A0A075B651 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav4-4-dv10A0A075B651 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav4-4-dv10A0A075B651 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trav4-4-dv10A0A075B651 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.36■□□□□ 0.85
Trav4-4-dv10A0A075B651 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav4-4-dv10A0A075B651 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav4-4-dv10A0A075B651 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trav4-4-dv10A0A075B651 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms