Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trav6-7-dv9A0A075B639 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.5■■□□□ 1.51
Trav6-7-dv9A0A075B639 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trav6-7-dv9A0A075B639 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trav6-7-dv9A0A075B639 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Trav6-7-dv9A0A075B639 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Trav6-7-dv9A0A075B639 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trav6-7-dv9A0A075B639 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.36■■□□□ 1.49
Trav6-7-dv9A0A075B639 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trav6-7-dv9A0A075B639 Rab21-202ENSMUST00000218831 843 ntBASIC24.34■■□□□ 1.49
Trav6-7-dv9A0A075B639 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Trav6-7-dv9A0A075B639 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trav6-7-dv9A0A075B639 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Trav6-7-dv9A0A075B639 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Trav6-7-dv9A0A075B639 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trav6-7-dv9A0A075B639 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.17■■□□□ 1.46
Trav6-7-dv9A0A075B639 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.17■■□□□ 1.46
Trav6-7-dv9A0A075B639 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trav6-7-dv9A0A075B639 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
Trav6-7-dv9A0A075B639 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trav6-7-dv9A0A075B639 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Trav6-7-dv9A0A075B639 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Trav6-7-dv9A0A075B639 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.07■■□□□ 1.44
Trav6-7-dv9A0A075B639 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Trav6-7-dv9A0A075B639 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
Trav6-7-dv9A0A075B639 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.03■■□□□ 1.44
Trav6-7-dv9A0A075B639 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Trav6-7-dv9A0A075B639 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Trav6-7-dv9A0A075B639 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trav6-7-dv9A0A075B639 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.01■■□□□ 1.43
Trav6-7-dv9A0A075B639 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Trav6-7-dv9A0A075B639 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24■■□□□ 1.43
Trav6-7-dv9A0A075B639 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trav6-7-dv9A0A075B639 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trav6-7-dv9A0A075B639 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trav6-7-dv9A0A075B639 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trav6-7-dv9A0A075B639 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Trav6-7-dv9A0A075B639 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Trav6-7-dv9A0A075B639 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trav6-7-dv9A0A075B639 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trav6-7-dv9A0A075B639 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trav6-7-dv9A0A075B639 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trav6-7-dv9A0A075B639 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Trav6-7-dv9A0A075B639 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Trav6-7-dv9A0A075B639 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.87■■□□□ 1.41
Trav6-7-dv9A0A075B639 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trav6-7-dv9A0A075B639 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Trav6-7-dv9A0A075B639 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.84■■□□□ 1.41
Trav6-7-dv9A0A075B639 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trav6-7-dv9A0A075B639 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Trav6-7-dv9A0A075B639 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.81■■□□□ 1.4
Trav6-7-dv9A0A075B639 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trav6-7-dv9A0A075B639 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trav6-7-dv9A0A075B639 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trav6-7-dv9A0A075B639 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trav6-7-dv9A0A075B639 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trav6-7-dv9A0A075B639 Gm25262-201ENSMUST00000174934 133 ntBASIC23.76■■□□□ 1.39
Trav6-7-dv9A0A075B639 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Trav6-7-dv9A0A075B639 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Trav6-7-dv9A0A075B639 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trav6-7-dv9A0A075B639 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Trav6-7-dv9A0A075B639 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trav6-7-dv9A0A075B639 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trav6-7-dv9A0A075B639 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Trav6-7-dv9A0A075B639 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trav6-7-dv9A0A075B639 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trav6-7-dv9A0A075B639 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Trav6-7-dv9A0A075B639 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trav6-7-dv9A0A075B639 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.51■■□□□ 1.35
Trav6-7-dv9A0A075B639 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trav6-7-dv9A0A075B639 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trav6-7-dv9A0A075B639 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trav6-7-dv9A0A075B639 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trav6-7-dv9A0A075B639 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.47■■□□□ 1.35
Trav6-7-dv9A0A075B639 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trav6-7-dv9A0A075B639 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
Trav6-7-dv9A0A075B639 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Trav6-7-dv9A0A075B639 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.41■■□□□ 1.34
Trav6-7-dv9A0A075B639 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trav6-7-dv9A0A075B639 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Trav6-7-dv9A0A075B639 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.38■■□□□ 1.33
Trav6-7-dv9A0A075B639 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trav6-7-dv9A0A075B639 Mipep-204ENSMUST00000225043 1548 ntBASIC23.37■■□□□ 1.33
Trav6-7-dv9A0A075B639 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trav6-7-dv9A0A075B639 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.35■■□□□ 1.33
Trav6-7-dv9A0A075B639 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trav6-7-dv9A0A075B639 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.34■■□□□ 1.33
Trav6-7-dv9A0A075B639 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trav6-7-dv9A0A075B639 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trav6-7-dv9A0A075B639 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trav6-7-dv9A0A075B639 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.28■■□□□ 1.32
Trav6-7-dv9A0A075B639 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Trav6-7-dv9A0A075B639 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Trav6-7-dv9A0A075B639 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.23■■□□□ 1.31
Trav6-7-dv9A0A075B639 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.22■■□□□ 1.31
Trav6-7-dv9A0A075B639 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Trav6-7-dv9A0A075B639 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trav6-7-dv9A0A075B639 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trav6-7-dv9A0A075B639 Gm27322-201ENSMUST00000184007 104 ntBASIC23.18■■□□□ 1.3
Trav6-7-dv9A0A075B639 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms