Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav4d-3A0A075B625 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav4d-3A0A075B625 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav4d-3A0A075B625 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav4d-3A0A075B625 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav4d-3A0A075B625 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trav4d-3A0A075B625 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Trav4d-3A0A075B625 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav4d-3A0A075B625 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.42■□□□□ 0.54
Trav4d-3A0A075B625 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav4d-3A0A075B625 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav4d-3A0A075B625 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav4d-3A0A075B625 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trav4d-3A0A075B625 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav4d-3A0A075B625 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav4d-3A0A075B625 Zxda-201ENSMUST00000117281 2621 ntBASIC18.32■□□□□ 0.52
Trav4d-3A0A075B625 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.31■□□□□ 0.52
Trav4d-3A0A075B625 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav4d-3A0A075B625 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav4d-3A0A075B625 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.22■□□□□ 0.51
Trav4d-3A0A075B625 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav4d-3A0A075B625 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Trav4d-3A0A075B625 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trav4d-3A0A075B625 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav4d-3A0A075B625 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav4d-3A0A075B625 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav4d-3A0A075B625 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav4d-3A0A075B625 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav4d-3A0A075B625 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav4d-3A0A075B625 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav4d-3A0A075B625 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav4d-3A0A075B625 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav4d-3A0A075B625 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav4d-3A0A075B625 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav4d-3A0A075B625 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trav4d-3A0A075B625 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav4d-3A0A075B625 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav4d-3A0A075B625 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav4d-3A0A075B625 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav4d-3A0A075B625 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.04■□□□□ 0.48
Trav4d-3A0A075B625 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.03■□□□□ 0.48
Trav4d-3A0A075B625 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Trav4d-3A0A075B625 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav4d-3A0A075B625 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trav4d-3A0A075B625 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.01■□□□□ 0.47
Trav4d-3A0A075B625 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav4d-3A0A075B625 Gm24109-201ENSMUST00000175489 103 ntBASIC17.99■□□□□ 0.47
Trav4d-3A0A075B625 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav4d-3A0A075B625 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav4d-3A0A075B625 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav4d-3A0A075B625 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav4d-3A0A075B625 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.97■□□□□ 0.47
Trav4d-3A0A075B625 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav4d-3A0A075B625 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC17.95■□□□□ 0.46
Trav4d-3A0A075B625 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav4d-3A0A075B625 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav4d-3A0A075B625 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav4d-3A0A075B625 AC153911.1-202ENSMUST00000218534 1034 ntBASIC17.94■□□□□ 0.46
Trav4d-3A0A075B625 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav4d-3A0A075B625 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav4d-3A0A075B625 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav4d-3A0A075B625 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trav4d-3A0A075B625 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav4d-3A0A075B625 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav4d-3A0A075B625 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav4d-3A0A075B625 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trav4d-3A0A075B625 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav4d-3A0A075B625 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav4d-3A0A075B625 Gm23366-201ENSMUST00000175022 89 ntBASIC17.89■□□□□ 0.45
Trav4d-3A0A075B625 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav4d-3A0A075B625 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav4d-3A0A075B625 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trav4d-3A0A075B625 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav4d-3A0A075B625 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav4d-3A0A075B625 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav4d-3A0A075B625 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav4d-3A0A075B625 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav4d-3A0A075B625 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.8■□□□□ 0.44
Trav4d-3A0A075B625 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav4d-3A0A075B625 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav4d-3A0A075B625 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav4d-3A0A075B625 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav4d-3A0A075B625 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav4d-3A0A075B625 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.76■□□□□ 0.43
Trav4d-3A0A075B625 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav4d-3A0A075B625 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav4d-3A0A075B625 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav4d-3A0A075B625 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav4d-3A0A075B625 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav4d-3A0A075B625 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav4d-3A0A075B625 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav4d-3A0A075B625 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav4d-3A0A075B625 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav4d-3A0A075B625 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav4d-3A0A075B625 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav4d-3A0A075B625 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav4d-3A0A075B625 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav4d-3A0A075B625 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trav4d-3A0A075B625 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav4d-3A0A075B625 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms