Protein–RNA interactions for Protein: A0A075B5L3

Igkv4-90, Immunoglobulin kappa chain variable 4-90 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-90A0A075B5L3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv4-90A0A075B5L3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Igkv4-90A0A075B5L3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv4-90A0A075B5L3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.24■□□□□ 0.99
Igkv4-90A0A075B5L3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Igkv4-90A0A075B5L3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv4-90A0A075B5L3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Igkv4-90A0A075B5L3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Igkv4-90A0A075B5L3 Rab21-202ENSMUST00000218831 843 ntBASIC21.2■□□□□ 0.98
Igkv4-90A0A075B5L3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Igkv4-90A0A075B5L3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Igkv4-90A0A075B5L3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv4-90A0A075B5L3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv4-90A0A075B5L3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Igkv4-90A0A075B5L3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Igkv4-90A0A075B5L3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.05■□□□□ 0.96
Igkv4-90A0A075B5L3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv4-90A0A075B5L3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Igkv4-90A0A075B5L3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21■□□□□ 0.95
Igkv4-90A0A075B5L3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21■□□□□ 0.95
Igkv4-90A0A075B5L3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Igkv4-90A0A075B5L3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Igkv4-90A0A075B5L3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Igkv4-90A0A075B5L3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Igkv4-90A0A075B5L3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.94■□□□□ 0.94
Igkv4-90A0A075B5L3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Igkv4-90A0A075B5L3 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.9■□□□□ 0.94
Igkv4-90A0A075B5L3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.9■□□□□ 0.94
Igkv4-90A0A075B5L3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.89■□□□□ 0.93
Igkv4-90A0A075B5L3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Igkv4-90A0A075B5L3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Igkv4-90A0A075B5L3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Igkv4-90A0A075B5L3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Igkv4-90A0A075B5L3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Igkv4-90A0A075B5L3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Igkv4-90A0A075B5L3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Igkv4-90A0A075B5L3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Igkv4-90A0A075B5L3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Igkv4-90A0A075B5L3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Igkv4-90A0A075B5L3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Igkv4-90A0A075B5L3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Igkv4-90A0A075B5L3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Igkv4-90A0A075B5L3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Igkv4-90A0A075B5L3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Igkv4-90A0A075B5L3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Igkv4-90A0A075B5L3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Igkv4-90A0A075B5L3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv4-90A0A075B5L3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv4-90A0A075B5L3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv4-90A0A075B5L3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv4-90A0A075B5L3 Gm25262-201ENSMUST00000174934 133 ntBASIC20.72■□□□□ 0.91
Igkv4-90A0A075B5L3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.72■□□□□ 0.91
Igkv4-90A0A075B5L3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Igkv4-90A0A075B5L3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Igkv4-90A0A075B5L3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Igkv4-90A0A075B5L3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Igkv4-90A0A075B5L3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.65■□□□□ 0.9
Igkv4-90A0A075B5L3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Igkv4-90A0A075B5L3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Igkv4-90A0A075B5L3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Igkv4-90A0A075B5L3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Igkv4-90A0A075B5L3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Igkv4-90A0A075B5L3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Igkv4-90A0A075B5L3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Igkv4-90A0A075B5L3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Igkv4-90A0A075B5L3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Igkv4-90A0A075B5L3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Igkv4-90A0A075B5L3 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.46■□□□□ 0.87
Igkv4-90A0A075B5L3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Igkv4-90A0A075B5L3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Igkv4-90A0A075B5L3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv4-90A0A075B5L3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Igkv4-90A0A075B5L3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.4■□□□□ 0.86
Igkv4-90A0A075B5L3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Igkv4-90A0A075B5L3 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.39■□□□□ 0.85
Igkv4-90A0A075B5L3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Igkv4-90A0A075B5L3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Igkv4-90A0A075B5L3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv4-90A0A075B5L3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.37■□□□□ 0.85
Igkv4-90A0A075B5L3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv4-90A0A075B5L3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Igkv4-90A0A075B5L3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Igkv4-90A0A075B5L3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Igkv4-90A0A075B5L3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Igkv4-90A0A075B5L3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.32■□□□□ 0.84
Igkv4-90A0A075B5L3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv4-90A0A075B5L3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv4-90A0A075B5L3 Mipep-204ENSMUST00000225043 1548 ntBASIC20.3■□□□□ 0.84
Igkv4-90A0A075B5L3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv4-90A0A075B5L3 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.27■□□□□ 0.84
Igkv4-90A0A075B5L3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv4-90A0A075B5L3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.24■□□□□ 0.83
Igkv4-90A0A075B5L3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Igkv4-90A0A075B5L3 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.24■□□□□ 0.83
Igkv4-90A0A075B5L3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv4-90A0A075B5L3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.22■□□□□ 0.83
Igkv4-90A0A075B5L3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv4-90A0A075B5L3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Igkv4-90A0A075B5L3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.19■□□□□ 0.82
Igkv4-90A0A075B5L3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms