Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTN3Q9P232 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNTN3Q9P232 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNTN3Q9P232 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.13■□□□□ 0.33
CNTN3Q9P232 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTN3Q9P232 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTN3Q9P232 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNTN3Q9P232 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNTN3Q9P232 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTN3Q9P232 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTN3Q9P232 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTN3Q9P232 AL607033.1-201ENST00000623900 1599 ntBASIC17.12■□□□□ 0.33
CNTN3Q9P232 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTN3Q9P232 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 RN7SL692P-201ENST00000464677 288 ntBASIC17.12■□□□□ 0.33
CNTN3Q9P232 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 AL158212.4-201ENST00000624062 1286 ntBASIC17.12■□□□□ 0.33
CNTN3Q9P232 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTN3Q9P232 LINC02447-202ENST00000501888 2146 ntBASIC17.12■□□□□ 0.33
CNTN3Q9P232 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTN3Q9P232 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTN3Q9P232 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTN3Q9P232 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTN3Q9P232 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CNTN3Q9P232 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTN3Q9P232 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTN3Q9P232 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTN3Q9P232 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNTN3Q9P232 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNTN3Q9P232 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTN3Q9P232 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTN3Q9P232 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTN3Q9P232 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTN3Q9P232 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNTN3Q9P232 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTN3Q9P232 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 TOMM22P5-201ENST00000416399 439 ntBASIC17.11■□□□□ 0.33
CNTN3Q9P232 KRT18P64-201ENST00000434946 1219 ntBASIC17.11■□□□□ 0.33
CNTN3Q9P232 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 WASH4P-201ENST00000564273 1246 ntBASIC17.11■□□□□ 0.33
CNTN3Q9P232 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 AC008494.3-201ENST00000606615 944 ntBASIC17.11■□□□□ 0.33
CNTN3Q9P232 AC093726.1-201ENST00000608064 963 ntBASIC17.11■□□□□ 0.33
CNTN3Q9P232 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 AC007431.3-201ENST00000623221 587 ntBASIC17.11■□□□□ 0.33
CNTN3Q9P232 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNTN3Q9P232 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTN3Q9P232 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTN3Q9P232 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTN3Q9P232 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.11■□□□□ 0.33
CNTN3Q9P232 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNTN3Q9P232 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CNTN3Q9P232 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.1■□□□□ 0.33
CNTN3Q9P232 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CNTN3Q9P232 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.1■□□□□ 0.33
CNTN3Q9P232 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CNTN3Q9P232 DGCR5-201ENST00000399539 862 ntBASIC17.1■□□□□ 0.33
CNTN3Q9P232 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.1■□□□□ 0.33
CNTN3Q9P232 COX5BP8-201ENST00000416911 349 ntBASIC17.1■□□□□ 0.33
CNTN3Q9P232 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.1■□□□□ 0.33
CNTN3Q9P232 GAPDHP21-201ENST00000450301 1010 ntBASIC17.1■□□□□ 0.33
CNTN3Q9P232 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CNTN3Q9P232 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.1■□□□□ 0.33
CNTN3Q9P232 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.1■□□□□ 0.33
CNTN3Q9P232 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.1■□□□□ 0.33
CNTN3Q9P232 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.1■□□□□ 0.33
CNTN3Q9P232 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms