Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 FNTAP2-201ENST00000430308 634 ntBASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 POM121L10P-201ENST00000436994 1285 ntBASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 ADM-202ENST00000524948 584 ntTSL 2 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SLC52A1Q9NWF4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 RNU1-114P-201ENST00000365297 166 ntBASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 NUS1P3-201ENST00000423502 862 ntBASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 HSPB1P2-201ENST00000448722 546 ntBASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 AC005077.2-201ENST00000449786 690 ntBASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 MIR4313-201ENST00000580760 101 ntBASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SLC52A1Q9NWF4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 MIR3619-201ENST00000579667 83 ntBASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 AC015967.2-201ENST00000624092 234 ntBASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 AC006435.4-201ENST00000625037 234 ntBASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 AL356737.1-201ENST00000634391 234 ntBASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
SLC52A1Q9NWF4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC52A1Q9NWF4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms