Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 POU5F1P6-201ENST00000466990 990 ntBASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 AC007064.4-201ENST00000637740 555 ntBASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 BCAR1-209ENST00000546196 1340 ntBASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 AL603832.2-201ENST00000566195 2125 ntBASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 REXO1L8P-201ENST00000604378 1897 ntBASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CHRDL1Q9BU40 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 AC006449.6-201ENST00000612330 2296 ntBASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 AC025580.3-201ENST00000617932 1424 ntBASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 SLC25A1P1-201ENST00000528351 927 ntBASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 MIR3909-201ENST00000579518 119 ntBASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 AC004877.2-201ENST00000623941 599 ntBASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CHRDL1Q9BU40 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CHRDL1Q9BU40 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms