Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.42■□□□□ 0.22
CDCA3Q99618 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDCA3Q99618 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDCA3Q99618 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.41■□□□□ 0.22
CDCA3Q99618 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDCA3Q99618 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CDCA3Q99618 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.41■□□□□ 0.22
CDCA3Q99618 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CDCA3Q99618 ACTBP8-201ENST00000403258 1108 ntBASIC16.41■□□□□ 0.22
CDCA3Q99618 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CDCA3Q99618 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.41■□□□□ 0.22
CDCA3Q99618 FNTAP2-201ENST00000430308 634 ntBASIC16.41■□□□□ 0.22
CDCA3Q99618 POM121L10P-201ENST00000436994 1285 ntBASIC16.41■□□□□ 0.22
CDCA3Q99618 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.41■□□□□ 0.22
CDCA3Q99618 AC005077.2-201ENST00000449786 690 ntBASIC16.41■□□□□ 0.22
CDCA3Q99618 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.41■□□□□ 0.22
CDCA3Q99618 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.41■□□□□ 0.22
CDCA3Q99618 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.41■□□□□ 0.22
CDCA3Q99618 AC079328.1-201ENST00000560358 952 ntBASIC16.41■□□□□ 0.22
CDCA3Q99618 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.41■□□□□ 0.22
CDCA3Q99618 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.41■□□□□ 0.22
CDCA3Q99618 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 AC139713.2-201ENST00000641328 2723 ntBASIC16.41■□□□□ 0.22
CDCA3Q99618 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
CDCA3Q99618 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDCA3Q99618 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDCA3Q99618 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDCA3Q99618 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDCA3Q99618 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDCA3Q99618 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDCA3Q99618 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.4■□□□□ 0.22
CDCA3Q99618 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.4■□□□□ 0.22
CDCA3Q99618 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDCA3Q99618 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
CDCA3Q99618 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDCA3Q99618 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
CDCA3Q99618 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.4■□□□□ 0.22
CDCA3Q99618 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDCA3Q99618 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDCA3Q99618 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDCA3Q99618 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDCA3Q99618 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDCA3Q99618 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.4■□□□□ 0.22
CDCA3Q99618 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.4■□□□□ 0.22
CDCA3Q99618 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.4■□□□□ 0.22
CDCA3Q99618 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.4■□□□□ 0.22
CDCA3Q99618 MIR663B-201ENST00000408361 115 ntBASIC16.4■□□□□ 0.22
CDCA3Q99618 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.4■□□□□ 0.22
CDCA3Q99618 AC114812.1-204ENST00000449669 728 ntBASIC16.4■□□□□ 0.22
CDCA3Q99618 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDCA3Q99618 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.4■□□□□ 0.22
CDCA3Q99618 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CDCA3Q99618 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CDCA3Q99618 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
CDCA3Q99618 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDCA3Q99618 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDCA3Q99618 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDCA3Q99618 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDCA3Q99618 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDCA3Q99618 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
CDCA3Q99618 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CDCA3Q99618 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDCA3Q99618 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.39■□□□□ 0.21
CDCA3Q99618 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.39■□□□□ 0.21
CDCA3Q99618 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.39■□□□□ 0.21
CDCA3Q99618 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDCA3Q99618 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDCA3Q99618 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDCA3Q99618 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.39■□□□□ 0.21
CDCA3Q99618 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDCA3Q99618 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDCA3Q99618 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDCA3Q99618 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDCA3Q99618 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDCA3Q99618 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDCA3Q99618 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CDCA3Q99618 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.39■□□□□ 0.21
CDCA3Q99618 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.39■□□□□ 0.21
CDCA3Q99618 NUS1P3-201ENST00000423502 862 ntBASIC16.39■□□□□ 0.21
CDCA3Q99618 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.39■□□□□ 0.21
CDCA3Q99618 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CDCA3Q99618 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDCA3Q99618 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms