Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC092364.2-201ENST00000596710 2692 ntBASIC24.52■■□□□ 1.52
CFAP43Q8NDM7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CFAP43Q8NDM7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
CFAP43Q8NDM7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CFAP43Q8NDM7 CYP2AB1P-202ENST00000454440 1456 ntBASIC24.52■■□□□ 1.52
CFAP43Q8NDM7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CFAP43Q8NDM7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CFAP43Q8NDM7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 BTBD6P1-201ENST00000412176 1267 ntBASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 AC005077.2-201ENST00000449786 690 ntBASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CFAP43Q8NDM7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 MIR33B-201ENST00000385104 96 ntBASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 U62317.3-201ENST00000608319 855 ntBASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 AC138951.2-201ENST00000623455 1161 ntBASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 RERG-205ENST00000537647 935 ntTSL 2 BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 AC078819.1-201ENST00000547454 765 ntBASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 AC012085.1-201ENST00000548270 765 ntBASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 EEF1DP1-201ENST00000585891 896 ntBASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 AC097724.1-201ENST00000609581 426 ntBASIC24.5■■□□□ 1.51
CFAP43Q8NDM7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 MPRIPP1-201ENST00000452433 1089 ntBASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 AL596087.1-201ENST00000400979 1969 ntBASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CFAP43Q8NDM7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CFAP43Q8NDM7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CFAP43Q8NDM7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC24.48■■□□□ 1.51
CFAP43Q8NDM7 PCDHA14-201ENST00000506751 2298 ntBASIC24.48■■□□□ 1.51
CFAP43Q8NDM7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CFAP43Q8NDM7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CFAP43Q8NDM7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC24.48■■□□□ 1.51
CFAP43Q8NDM7 RPSAP36-202ENST00000494591 1261 ntBASIC24.48■■□□□ 1.51
CFAP43Q8NDM7 LINC02447-202ENST00000501888 2146 ntBASIC24.48■■□□□ 1.51
CFAP43Q8NDM7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC24.48■■□□□ 1.51
CFAP43Q8NDM7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
CFAP43Q8NDM7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC24.48■■□□□ 1.51
CFAP43Q8NDM7 AL096828.3-201ENST00000615354 462 ntBASIC24.48■■□□□ 1.51
CFAP43Q8NDM7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms