Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.06■□□□□ 0.64
SLX4Q8IY92 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLX4Q8IY92 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLX4Q8IY92 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLX4Q8IY92 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLX4Q8IY92 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.06■□□□□ 0.64
SLX4Q8IY92 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLX4Q8IY92 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLX4Q8IY92 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLX4Q8IY92 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLX4Q8IY92 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLX4Q8IY92 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC19.06■□□□□ 0.64
SLX4Q8IY92 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.06■□□□□ 0.64
SLX4Q8IY92 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC19.06■□□□□ 0.64
SLX4Q8IY92 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLX4Q8IY92 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.06■□□□□ 0.64
SLX4Q8IY92 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.06■□□□□ 0.64
SLX4Q8IY92 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLX4Q8IY92 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SLX4Q8IY92 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLX4Q8IY92 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SLX4Q8IY92 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.05■□□□□ 0.64
SLX4Q8IY92 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLX4Q8IY92 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC19.05■□□□□ 0.64
SLX4Q8IY92 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLX4Q8IY92 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC19.05■□□□□ 0.64
SLX4Q8IY92 RN7SL713P-201ENST00000582127 302 ntBASIC19.05■□□□□ 0.64
SLX4Q8IY92 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.05■□□□□ 0.64
SLX4Q8IY92 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLX4Q8IY92 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SLX4Q8IY92 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLX4Q8IY92 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLX4Q8IY92 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SLX4Q8IY92 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
SLX4Q8IY92 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLX4Q8IY92 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLX4Q8IY92 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLX4Q8IY92 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SLX4Q8IY92 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLX4Q8IY92 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SLX4Q8IY92 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLX4Q8IY92 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
SLX4Q8IY92 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 MIR769-201ENST00000390225 118 ntBASIC19.04■□□□□ 0.64
SLX4Q8IY92 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 EIF3FP3-201ENST00000434851 1086 ntBASIC19.04■□□□□ 0.64
SLX4Q8IY92 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 AC106886.4-201ENST00000623557 2502 ntBASIC19.04■□□□□ 0.64
SLX4Q8IY92 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLX4Q8IY92 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.04■□□□□ 0.64
SLX4Q8IY92 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLX4Q8IY92 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLX4Q8IY92 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLX4Q8IY92 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLX4Q8IY92 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLX4Q8IY92 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLX4Q8IY92 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLX4Q8IY92 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms