Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC040169.1-201ENST00000565382 521 ntBASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 SPDYE9P-201ENST00000570642 692 ntBASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 SPDYE10P-202ENST00000612005 668 ntBASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 SPDYE8P-202ENST00000612377 668 ntBASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00346Q8IVM7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 YBX2P1-201ENST00000394192 760 ntBASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 RNA5SP410-201ENST00000516285 106 ntBASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 KRT18P58-201ENST00000527480 1120 ntBASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 AC008267.7-201ENST00000624570 1194 ntBASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 AC013268.4-201ENST00000637413 2228 ntBASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 AC011477.6-201ENST00000604980 1927 ntBASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00346Q8IVM7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 AC104640.1-201ENST00000562617 2109 ntBASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 PPT1-215ENST00000641471 2368 ntBASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 AC126177.1-201ENST00000547829 2218 ntBASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00346Q8IVM7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms