Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NIPAL3Q6P499 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 AC073439.1-201ENST00000624121 1774 ntBASIC14.6□□□□□ -0.07
NIPAL3Q6P499 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 HAUS4P1-201ENST00000406739 1145 ntBASIC14.6□□□□□ -0.07
NIPAL3Q6P499 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 PRYP6-201ENST00000514804 343 ntBASIC14.6□□□□□ -0.07
NIPAL3Q6P499 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NIPAL3Q6P499 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 TMBIM7P-203ENST00000641617 1718 ntBASIC14.59□□□□□ -0.07
NIPAL3Q6P499 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 ADH5P3-201ENST00000433842 1137 ntBASIC14.59□□□□□ -0.07
NIPAL3Q6P499 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 KRT8P48-201ENST00000515599 1220 ntBASIC14.59□□□□□ -0.07
NIPAL3Q6P499 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NIPAL3Q6P499 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.58□□□□□ -0.07
NIPAL3Q6P499 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NIPAL3Q6P499 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.58□□□□□ -0.07
NIPAL3Q6P499 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
NIPAL3Q6P499 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms