Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RTL6Q6ICC9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RTL6Q6ICC9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.46□□□□□ -0.09
RTL6Q6ICC9 MTHFR-217ENST00000641820 1569 ntBASIC14.46□□□□□ -0.09
RTL6Q6ICC9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RTL6Q6ICC9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RTL6Q6ICC9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
RTL6Q6ICC9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RTL6Q6ICC9 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RTL6Q6ICC9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.46□□□□□ -0.1
RTL6Q6ICC9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.46□□□□□ -0.1
RTL6Q6ICC9 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.1
RTL6Q6ICC9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.46□□□□□ -0.1
RTL6Q6ICC9 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RTL6Q6ICC9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RTL6Q6ICC9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RTL6Q6ICC9 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RTL6Q6ICC9 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.45□□□□□ -0.1
RTL6Q6ICC9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 AL353779.1-201ENST00000434793 351 ntBASIC14.45□□□□□ -0.1
RTL6Q6ICC9 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 SPDYE18-201ENST00000510091 1050 ntBASIC14.45□□□□□ -0.1
RTL6Q6ICC9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 AL162727.3-201ENST00000635661 2787 ntBASIC14.45□□□□□ -0.1
RTL6Q6ICC9 AC005622.1-201ENST00000636801 1703 ntBASIC14.45□□□□□ -0.1
RTL6Q6ICC9 AL033527.5-202ENST00000641632 1098 ntBASIC14.45□□□□□ -0.1
RTL6Q6ICC9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 GGT3P-204ENST00000453783 1664 ntBASIC14.45□□□□□ -0.1
RTL6Q6ICC9 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RTL6Q6ICC9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 GK-202ENST00000378941 458 ntTSL 3 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 SERBP1P3-201ENST00000459980 809 ntBASIC14.44□□□□□ -0.1
RTL6Q6ICC9 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.44□□□□□ -0.1
RTL6Q6ICC9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms