Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRK2Q5S007 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRK2Q5S007 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 AL353637.1-201ENST00000451571 732 ntBASIC13.62□□□□□ -0.23
LRRK2Q5S007 AC104073.2-201ENST00000453737 312 ntBASIC13.62□□□□□ -0.23
LRRK2Q5S007 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 EIF5AP2-201ENST00000585668 1047 ntBASIC13.62□□□□□ -0.23
LRRK2Q5S007 RNF146-211ENST00000609447 607 ntTSL 4 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 AC004923.1-202ENST00000642106 209 ntBASIC13.62□□□□□ -0.23
LRRK2Q5S007 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 AC016396.2-201ENST00000562575 1417 ntBASIC13.62□□□□□ -0.23
LRRK2Q5S007 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 FTLP5-201ENST00000586853 534 ntBASIC13.62□□□□□ -0.23
LRRK2Q5S007 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LRRK2Q5S007 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRK2Q5S007 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 GAPDHP40-201ENST00000505218 1006 ntBASIC13.61□□□□□ -0.23
LRRK2Q5S007 AC106794.1-201ENST00000506935 792 ntBASIC13.61□□□□□ -0.23
LRRK2Q5S007 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 AC073413.1-201ENST00000603927 732 ntBASIC13.61□□□□□ -0.23
LRRK2Q5S007 AC244157.2-201ENST00000616239 1006 ntBASIC13.61□□□□□ -0.23
LRRK2Q5S007 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 AL138688.1-201ENST00000624851 1594 ntBASIC13.61□□□□□ -0.23
LRRK2Q5S007 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 PLS3-210ENST00000626746 216 ntTSL 4 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms