Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRP54P61011 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.8■□□□□ 0.12
SRP54P61011 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRP54P61011 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRP54P61011 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SRP54P61011 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
SRP54P61011 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.79■□□□□ 0.12
SRP54P61011 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
SRP54P61011 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SRP54P61011 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SRP54P61011 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.79■□□□□ 0.12
SRP54P61011 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SRP54P61011 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.79■□□□□ 0.12
SRP54P61011 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.79■□□□□ 0.12
SRP54P61011 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
SRP54P61011 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.79■□□□□ 0.12
SRP54P61011 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.79■□□□□ 0.12
SRP54P61011 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.79■□□□□ 0.12
SRP54P61011 HIST3H2BA-201ENST00000436555 524 ntBASIC15.79■□□□□ 0.12
SRP54P61011 GAPDHP21-201ENST00000450301 1010 ntBASIC15.79■□□□□ 0.12
SRP54P61011 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.79■□□□□ 0.12
SRP54P61011 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.79■□□□□ 0.12
SRP54P61011 RN7SL692P-201ENST00000464677 288 ntBASIC15.79■□□□□ 0.12
SRP54P61011 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.79■□□□□ 0.12
SRP54P61011 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SRP54P61011 TP53TG3HP-202ENST00000569755 579 ntBASIC15.79■□□□□ 0.12
SRP54P61011 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.79■□□□□ 0.12
SRP54P61011 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.79■□□□□ 0.12
SRP54P61011 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.79■□□□□ 0.12
SRP54P61011 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.79■□□□□ 0.12
SRP54P61011 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.79■□□□□ 0.12
SRP54P61011 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.79■□□□□ 0.12
SRP54P61011 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.79■□□□□ 0.12
SRP54P61011 AC126755.1-201ENST00000525846 6405 ntBASIC15.79■□□□□ 0.12
SRP54P61011 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.79■□□□□ 0.12
SRP54P61011 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.79■□□□□ 0.12
SRP54P61011 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRP54P61011 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.78■□□□□ 0.12
SRP54P61011 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.78■□□□□ 0.12
SRP54P61011 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.78■□□□□ 0.12
SRP54P61011 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.78■□□□□ 0.12
SRP54P61011 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
SRP54P61011 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.78■□□□□ 0.12
SRP54P61011 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.78■□□□□ 0.12
SRP54P61011 AC087499.6-201ENST00000411576 835 ntBASIC15.78■□□□□ 0.12
SRP54P61011 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.78■□□□□ 0.12
SRP54P61011 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.78■□□□□ 0.12
SRP54P61011 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.78■□□□□ 0.12
SRP54P61011 AC093004.1-201ENST00000508850 424 ntBASIC15.78■□□□□ 0.12
SRP54P61011 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.78■□□□□ 0.12
SRP54P61011 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.78■□□□□ 0.12
SRP54P61011 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SRP54P61011 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
SRP54P61011 AC140912.1-201ENST00000577171 1054 ntBASIC15.78■□□□□ 0.12
SRP54P61011 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.78■□□□□ 0.12
SRP54P61011 AC004790.1-201ENST00000612686 536 ntBASIC15.78■□□□□ 0.12
SRP54P61011 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
SRP54P61011 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.78■□□□□ 0.12
SRP54P61011 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.78■□□□□ 0.12
SRP54P61011 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.78■□□□□ 0.12
SRP54P61011 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRP54P61011 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
SRP54P61011 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms