Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RIPK4P57078 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIPK4P57078 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC20.86■□□□□ 0.93
RIPK4P57078 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIPK4P57078 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RIPK4P57078 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RIPK4P57078 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
RIPK4P57078 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RIPK4P57078 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RIPK4P57078 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RIPK4P57078 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIPK4P57078 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RIPK4P57078 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RIPK4P57078 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RIPK4P57078 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RIPK4P57078 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.85■□□□□ 0.93
RIPK4P57078 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
RIPK4P57078 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.85■□□□□ 0.93
RIPK4P57078 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC20.85■□□□□ 0.93
RIPK4P57078 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RIPK4P57078 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIPK4P57078 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.85■□□□□ 0.93
RIPK4P57078 DOC2GP-202ENST00000514950 1163 ntBASIC20.85■□□□□ 0.93
RIPK4P57078 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.85■□□□□ 0.93
RIPK4P57078 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.85■□□□□ 0.93
RIPK4P57078 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIPK4P57078 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.85■□□□□ 0.93
RIPK4P57078 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIPK4P57078 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RIPK4P57078 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RIPK4P57078 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.85■□□□□ 0.93
RIPK4P57078 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIPK4P57078 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.85■□□□□ 0.93
RIPK4P57078 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIPK4P57078 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RIPK4P57078 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIPK4P57078 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC20.85■□□□□ 0.93
RIPK4P57078 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK4P57078 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC20.84■□□□□ 0.93
RIPK4P57078 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK4P57078 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.84■□□□□ 0.93
RIPK4P57078 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RIPK4P57078 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.84■□□□□ 0.93
RIPK4P57078 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC20.84■□□□□ 0.93
RIPK4P57078 AL513477.1-201ENST00000602865 2407 ntBASIC20.84■□□□□ 0.93
RIPK4P57078 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK4P57078 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RIPK4P57078 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK4P57078 FLII-221ENST00000578558 2377 ntTSL 5 BASIC20.84■□□□□ 0.93
RIPK4P57078 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK4P57078 SPDYE19P-201ENST00000338590 713 ntBASIC20.84■□□□□ 0.93
RIPK4P57078 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.84■□□□□ 0.93
RIPK4P57078 KRT18P64-201ENST00000434946 1219 ntBASIC20.84■□□□□ 0.93
RIPK4P57078 RPL13P2-201ENST00000440687 659 ntBASIC20.84■□□□□ 0.93
RIPK4P57078 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.84■□□□□ 0.93
RIPK4P57078 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK4P57078 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK4P57078 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.84■□□□□ 0.93
RIPK4P57078 AC092337.1-201ENST00000568699 1129 ntBASIC20.84■□□□□ 0.93
RIPK4P57078 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.84■□□□□ 0.93
RIPK4P57078 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
RIPK4P57078 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK4P57078 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC20.84■□□□□ 0.93
RIPK4P57078 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RIPK4P57078 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RIPK4P57078 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK4P57078 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RIPK4P57078 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RIPK4P57078 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
RIPK4P57078 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
RIPK4P57078 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RIPK4P57078 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
RIPK4P57078 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RIPK4P57078 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RIPK4P57078 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.83■□□□□ 0.93
RIPK4P57078 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
RIPK4P57078 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RIPK4P57078 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RIPK4P57078 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.83■□□□□ 0.93
RIPK4P57078 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RIPK4P57078 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RIPK4P57078 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RIPK4P57078 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.83■□□□□ 0.93
RIPK4P57078 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RIPK4P57078 AC004233.3-201ENST00000607794 1269 ntBASIC20.83■□□□□ 0.93
RIPK4P57078 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RIPK4P57078 AL596257.1-201ENST00000641463 2694 ntBASIC20.83■□□□□ 0.92
RIPK4P57078 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RIPK4P57078 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RIPK4P57078 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RIPK4P57078 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RIPK4P57078 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RIPK4P57078 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RIPK4P57078 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RIPK4P57078 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RIPK4P57078 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RIPK4P57078 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RIPK4P57078 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC20.82■□□□□ 0.92
RIPK4P57078 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC20.82■□□□□ 0.92
RIPK4P57078 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 186.6 ms